Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0398 |
Symbol | |
ID | 4436718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 349255 |
End bp | 350430 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639676126 |
Product | ABC-type branched-chain amino acid transport system, periplasmic component |
Protein accession | YP_819893 |
Protein GI | 116627274 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000849541 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAAAA AGATCACACT TATTGTGCTA GCCTTTTTTG CCTCCATTTT TTTGGTTGCC TGTGGCAAGT CACCTGATGT GACTGCTAAT GCCAAAGGTA CTAAGATTGG GGATACAATC AAAATTGGTG TTAACATGGA GTTGACAGGT GCTGTTGCGG CCTATGGTAA GTCTGAGCAG AATGGTATTA AGTTGGCTGT TGATGAAATT AACAAAGCAG GTGGCGTTGA CGGCAAAAAG ATAGAGCTCG TCACAAAAGA TAATAAATCT GAAAATGCTG AGGCTTCAAC ATCTTCAACG AACTTGGCTA TTCAGAGTAA TGTAAATGCT ATCGTTGGTC CATCGACATC AGGAGCCGTT GCTGCTGCTA GCCTCGTGTC ACAAAAAACA GGGGTTCCTT TGATAACACC TTCTGGTACA CAGGATGACC TTACGGTAGA TGCTAATGGA GTTAAGAAAT TTGTTTTTCG TACAACCTTT AAAGATAGCT ACCAAGGTGA AGTTTTGGCG GCTTATTCTT ACAATAATTT GAATGCTAAG AAAGTAGTTC TCTACTATGA TAATGCTTCG GATTATGCCA AGGGAATTGC GGATGAATTC AAGCGTAAAT ATAAAGGTCA AATCGTTACT GAAGCTACCT TTACTTCAGG TGACAAGGAC TATCAGTCAG CTTTGACTAA ATTTAAAGAC CAAGATTATG ATGCGGTTGT AATGCCTGGT TACTATACTG AGACTGGTAT TATTACAAAA CAAGCACGTG ACCTTGGAAT TGATAAACCA ATTTTAGGAC CTGACGGATT CAGTGATGAG AAATTTACTG AGCTTGCAGG TAAAAAGAAT GCTTCAAATG TCTACTATGT ATCAGGATAT TCAACAAATG TTGCTCTTTC TGACAAGGCA TCTGGTTTCA TTAAAGCATA TGAGAAAGCT TACAAAATTG AACCAAATAT GTTTGCGGCT CTAGCCTACG ATTCTGTTTA TATGGTTGCA GAAGCATCGA AAGGTGCAAA AACATCAGTA GATATTGCTG ATAACTTAGC AAATCTGAAA AACTTTGTTG GGGTTACTGG TAAAATGACA ATTGACAAGG ATCATAACCC TATTAAAGCA GCTCTTATGG TTAAAAGAGA TAATGGTGAA GAGGTTTCAG CGGAAGCCGT TGAAATTGAA AAATAA
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Protein sequence | MYKKITLIVL AFFASIFLVA CGKSPDVTAN AKGTKIGDTI KIGVNMELTG AVAAYGKSEQ NGIKLAVDEI NKAGGVDGKK IELVTKDNKS ENAEASTSST NLAIQSNVNA IVGPSTSGAV AAASLVSQKT GVPLITPSGT QDDLTVDANG VKKFVFRTTF KDSYQGEVLA AYSYNNLNAK KVVLYYDNAS DYAKGIADEF KRKYKGQIVT EATFTSGDKD YQSALTKFKD QDYDAVVMPG YYTETGIITK QARDLGIDKP ILGPDGFSDE KFTELAGKKN ASNVYYVSGY STNVALSDKA SGFIKAYEKA YKIEPNMFAA LAYDSVYMVA EASKGAKTSV DIADNLANLK NFVGVTGKMT IDKDHNPIKA ALMVKRDNGE EVSAEAVEIE K
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