Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0374 |
Symbol | |
ID | 4437931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 326959 |
End bp | 327771 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639676104 |
Product | HAD superfamily hydrolase |
Protein accession | YP_819871 |
Protein GI | 116627252 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0519666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAA AATTGATTGT ACTAGATCTT GATGGAACGC TCTTGCGCCC AGATGGAACT ATTTCAGAAT TCACACAAAA AACGATTAAA GATGTACAAA ATAAAGGACA CCAAGTTGTT ATTGCTACAG GTCGTCCTTA TCGTATGGCT ATTGACCATT ACAAAACACT AGGGTTAGAA ACACCACTCA TCACTTTTAA TGGCTCCTTG ACCAATCTTC CAGACCAAAA CTGGGCCTAT GAGCATTCGG TTAAATTAGA CAAAAAATAT CTGATTAACC TCTTACAACG ACATGATGAG TTAGAGATGG ATTTTCTGGC TAGTGAATAC CGAAAACACT TCTATATCTC TATGAATCAC CCAGAGCGTA TTCAACCACA ACTCTTTGGT GTTGATAAAA TCATTGAGGC TATGCGTTTG GAACCAGCAA AAATTACACG CAACCCAAAT GCTCTTCTTA TGCAAACTCG TCACGAAGAT AAGTACCAGC TAGCCGATGA TATCAAGAAA GACTTCAAGG AAGAAATTGA AGTTGATTCT TGGGGTGGCC CACTTAATAT TTTAGAGTTT TCACCTAAAG GTATTAACAA GGCTTATGCC CTAAACTACT TACTTAAGGT TATGCGCAAA TCAACGGATG ATTTGATTGC CTTTGGGGAC GAACACAATG ATACAGAGAT GTTGGAACTT GCCAAGACTG GTTATGCCAT GAAGAATGCT AGCTCTGTCC TTCTCCCCCA TGCTAACGAA CAAATTGAAT GGACTAATGA GGAAGACGGC GTTGCTCGCA AACTTCAGGA ACTACTTTTA TAA
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Protein sequence | MTKKLIVLDL DGTLLRPDGT ISEFTQKTIK DVQNKGHQVV IATGRPYRMA IDHYKTLGLE TPLITFNGSL TNLPDQNWAY EHSVKLDKKY LINLLQRHDE LEMDFLASEY RKHFYISMNH PERIQPQLFG VDKIIEAMRL EPAKITRNPN ALLMQTRHED KYQLADDIKK DFKEEIEVDS WGGPLNILEF SPKGINKAYA LNYLLKVMRK STDDLIAFGD EHNDTEMLEL AKTGYAMKNA SSVLLPHANE QIEWTNEEDG VARKLQELLL
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