Gene STER_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_0108 
Symbol 
ID4436976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp85705 
End bp86160 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content40% 
IMG OID639675868 
Productclass III stress gene transcriptional regulator 
Protein accessionYP_819654 
Protein GI116627035 
COG category[K] Transcription 
COG ID[COG4463] Transcriptional repressor of class III stress genes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00387323 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAA ATACATCAGA TAGTATAGAA GAATATATTA AAGAATTGCT GAGCCAGTCT 
GGAACTGCTG AGATTCAACG CTCGAACTTA GCAGATGCTT TTCAAGTAGT ACCAAGTCAG
ATTAACTATG TTATCAAGAC TCGTTTTACA GAGAGTCGTG GGTATATTGT TGAGAGCAAA
CGTGGTGGTG GCGGCTATAT TCGCATTGTC AAAGTTAGAT TCTCCGACAA ACACCATATG
ATTAATGATT TGCTGCAAAA TTTGGCAGAT CAGCTCAGCG AACAAGTCTT TACAGACGTC
ATTCAGTTGC TTTTTGATGA AAAGATTATC ACTGAGCGTG AGGGAAATTT GATTTTAGCG
ACTGCTAGTG ATGATGTTTT AGGCGAAGAT GCGGCTATCA TTCGTTCGCG TATTCTACGC
TCGCTATTAC TTAGATTGGA TAGAGAAGGG AATTAG
 
Protein sequence
MARNTSDSIE EYIKELLSQS GTAEIQRSNL ADAFQVVPSQ INYVIKTRFT ESRGYIVESK 
RGGGGYIRIV KVRFSDKHHM INDLLQNLAD QLSEQVFTDV IQLLFDEKII TEREGNLILA
TASDDVLGED AAIIRSRILR SLLLRLDREG N