| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_A0153 |
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| Symbol | |
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| ID | 1172576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004349 |
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| Strand | - |
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| Start bp | 140488 |
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| End bp | 143625 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637346592 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | NP_720469 |
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| Protein GI | 24376361 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAT ATATTATCGA GGCGTCCATC AGGCAGCGAT TTATGGTGTT GATTATCGCC
ATCATGATCA CTGTTTGGGG CGTACAGGAG CTGCGAAAAA CGCCGCTCGA TGCGCTGCCG
GATTTATCCG ATGTGCAAGT GATCATTAAA ACCCCTTATC CGGGTCAAGC GCCAAAATTG
GTTGAAGAAC AAGTGACTTA TCCCTTGTCT ACCGCCATGT TAGCCGTACC TGGTGCTAAA
ACCGTGCGTG GTTATTCCAT GTTTGGCGAC TCTTACGTGT ATGTAATTTT TGAAGAAGGC
ACCGACATTT ACTGGGCTCG CTCACGGGTG CTCGAATACC TGAGTCAGAT CAGCAGCCGT
TTACCGCAAA ATGTGCAACC TTCCCTCGGC CCAGATGCAT CTGGCGTTGG TTGGGTGTTT
GAATATGCGC TGGTCGATCG CTCCGGCAAT TTAGATTTAT CGCAACTCAA GAGTCTGCAG
GATTGGTACC TCAAGCTAGA GCTGCAAAGC GTGGCGGGCG TGTCTGAAGT CGCCACCGTT
GGTGGTATGG AGCAGACCTA CCAGATCGTA CTCGAACCCG ACAAAATGGC GATCTATAAA
CTGGATATCG CCAGCATTAA AGATGCGATA GAAAAATCTA ATAGCGAAAC TGGCGGCTCG
GTCATCGAAA TGGCTGAAGC CGAGTATATG GTACGCGCCA AAGGCTATCG ACAGACGCTA
GAGGATTTTC GTGAAATCCC CCTTGGCATC ACCAGTCCCT CTGGCACAGG TTTAACCCTC
AAAGATGTTG CTACTGTGCG TAAAGGCCCA GCTTCACGCC GCGGCATAGC CGAACTCGAC
GGTGAAGGTG AAGTCGTTGG CGGAATTGTG GTGATGCGTT ACGGCGAAAA CGCCTTAGCG
ACGATTGATG CGGTGAAAGC AAAACTCGAA GAACTCAAAG CCGGCCTGCC CGATGGGGTT
GAGATTATCC CAACCTACGA CAGATCTCAC TTGATCCTTA AGTCCGTCGA CAACTTGTTT
AGCAAGGTCG TCGAAGAAAT GTTGGTGGTC GGCTTAGTCT GTTTGCTGTT TTTGCTGCAT
GCGCGCTCCA CACTCGTGGC CGTGATCACC CTGCCGCTAT CTATCCTAAT CGCCTTTATT
GTGATGAATA AAATGGGTGT TAACGCCAAT ATCATGAGCC TTGGCGGCAT CGCCATTGCC
ATCGGCGCCG TGGTGGACGG CGCGATTGTA ATGATCGAAA ACTTGCACAA GCATTTAGAG
CATTTTAAAG CGGATCATAA TCGCGAACCC GATACGAAAG AGCATTGGCG CATCGTCACC
GAAGCGTCGA TTGAAGTCGG CCCTGCGTTA TTTTTCTCAT TAATTATTAT TACCTTAAGC
TTTGTACCTG TGTTTGCGCT CGAGGCGCAG GAAGGTCGAT TATTCGCGCC ATTGGCCTAC
ACTAAAACCT TCGCCATGGC AGCGGCGGCC TTTTTATCGA TCACCTTAGT GCCGATTTTG
ATGGGTTACT TTATTCGCGG CAAAATCCCC AGCGAACGTA GCAATCCCAT CAGCCGTTTC
TTGATCGCGA TTTATCAACC TTCACTAAAA CTGGTGCTGA AATTCCCTAA AGTCACCCTG
ATGTTAGCGT TAATCGCGCT GGCCAGCGCT TGGTATCCTA TGACCCGCAT GGGCAGCGAG
TTTATGCCCA CACTCGAAGA AGGCGATTTG CTCTACATGC CAACGGCATT ACCCGGCATC
AGTGCCAGCA AGGCCGCCGA AGTGCTGCAG CAAACCGACC GTTTAATCAA AACCGTGCCC
GAAGTGGCCC GCGTGTTTGG CAAAGTAGGC CGCGCCGAAA CCGCGACCGA TCCCGCGCCG
CTGACTATGC TTGAAACCAC TATCATGCTT AAACCCCATG ACGAATGGCG TGAAGGCATG
ACCTTAGATG GCATTATTGC CCAGCTACAG CAAACCGTAA AAGTACCTGG ACTCACCAAT
GCTTGGGTGC AACCCATCAA AACCCGAATC GACATGCTCT CGACGGGGAT CAAAACCCCT
GTCGGCATTA AGATCACTGG GGCCGATGTC AACGAACTGC AAAGCATTGG CACTAAGATT
GAAGCTATCT TAAGCAAAGT GCCACACACC AAATCGGCCT ACGCCGAACG CAGTGGCGGC
GGCCGTTATA TCGATATCAG TCCGAAACTG GATGTGGCCG CACGTTACGG TATGACGTTG
CAGGATATTC AAGATGTGGT GCGTTATGCC ATTGGCGGTA TGGATATTGG TGAGTCGGTA
CAAGGCGCCG AACGTTATCC AATCAACCTG CGTTATCCCC GTGAGCTACG CGATAATATC
GAAAAGCTGC GCGAACTCCC TGTGATCACT AAGTCGGGGC ATTATCTGCC GCTACGTAAC
TTGGCCGACA TCGAAATTAA CGATGGCGCG CCTATGTTAA AGAGTGAGAA TGGCCGCTTA
ATCTCTTGGG TGTTTATCGA TATCGAGGGC ACCTCTATCG GTGAGTATAT TGCCACCGCG
AAAACGGCCT TAGATGCCGA ACTCGTCGTC CCACCCCGTT ACAGCTATAG CTTTGCGGGT
CAGTACGAAT ATATGCAAAG GGTCGATGCT AAGCTTAAAC AAGTGATCCC TATGGCATTA
GCCGTCATCT TCATCCTGCT GATGATGACC TTCGGCTCCA CCATTCAGGC TAGCATTATT
ATGCTAAGCC TCCCCTTCGC ATTGGTCGGC AGCACTTGGT TGTTGTATCT GCTGGATTAC
AACATCTCAG TGGCCGTCGC TGTCGGTATG ATTGCCTTAG CGGGTGTCGC CGCCGAGTTT
GGGGTGGTGA TGTTGGTATA TCTCAATAAC GCCATCAAGC ACAGGCAAGA AAAAGATAAT
TACCACAGCG TCAGCGACTT AAAAGAAGCG TTAATGGAAG GTGCCGTTAT GCGGATCCGC
CCCAAAGCCA TGACAGTAGC GACCATCTTC TTCGGCCTAC TCCCCATTAT GTGGGGTGCA
GGATCGGGTA ACGATGTGAT GCAGAAAATT GCCGCACCTA TGGTCGGTGG TATGGTTACT
GCCCCATTAT TGTCACTGTT TCTACTACCC GCACTTTATC TACTGATTTA CTCACGTAAA
TTAAAGAAAG ATGCTTAG
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| Protein sequence | MLKYIIEASI RQRFMVLIIA IMITVWGVQE LRKTPLDALP DLSDVQVIIK TPYPGQAPKL
VEEQVTYPLS TAMLAVPGAK TVRGYSMFGD SYVYVIFEEG TDIYWARSRV LEYLSQISSR
LPQNVQPSLG PDASGVGWVF EYALVDRSGN LDLSQLKSLQ DWYLKLELQS VAGVSEVATV
GGMEQTYQIV LEPDKMAIYK LDIASIKDAI EKSNSETGGS VIEMAEAEYM VRAKGYRQTL
EDFREIPLGI TSPSGTGLTL KDVATVRKGP ASRRGIAELD GEGEVVGGIV VMRYGENALA
TIDAVKAKLE ELKAGLPDGV EIIPTYDRSH LILKSVDNLF SKVVEEMLVV GLVCLLFLLH
ARSTLVAVIT LPLSILIAFI VMNKMGVNAN IMSLGGIAIA IGAVVDGAIV MIENLHKHLE
HFKADHNREP DTKEHWRIVT EASIEVGPAL FFSLIIITLS FVPVFALEAQ EGRLFAPLAY
TKTFAMAAAA FLSITLVPIL MGYFIRGKIP SERSNPISRF LIAIYQPSLK LVLKFPKVTL
MLALIALASA WYPMTRMGSE FMPTLEEGDL LYMPTALPGI SASKAAEVLQ QTDRLIKTVP
EVARVFGKVG RAETATDPAP LTMLETTIML KPHDEWREGM TLDGIIAQLQ QTVKVPGLTN
AWVQPIKTRI DMLSTGIKTP VGIKITGADV NELQSIGTKI EAILSKVPHT KSAYAERSGG
GRYIDISPKL DVAARYGMTL QDIQDVVRYA IGGMDIGESV QGAERYPINL RYPRELRDNI
EKLRELPVIT KSGHYLPLRN LADIEINDGA PMLKSENGRL ISWVFIDIEG TSIGEYIATA
KTALDAELVV PPRYSYSFAG QYEYMQRVDA KLKQVIPMAL AVIFILLMMT FGSTIQASII
MLSLPFALVG STWLLYLLDY NISVAVAVGM IALAGVAAEF GVVMLVYLNN AIKHRQEKDN
YHSVSDLKEA LMEGAVMRIR PKAMTVATIF FGLLPIMWGA GSGNDVMQKI AAPMVGGMVT
APLLSLFLLP ALYLLIYSRK LKKDA
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