Gene SO_A0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_A0105 
Symbol 
ID1172528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004349 
Strand
Start bp84452 
End bp85009 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content42% 
IMG OID637346554 
ProductISSod8, transposase 
Protein accessionNP_720431 
Protein GI24376323 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCTCA ATTTTTCTGG CAGACATTTT CCATCTGATA TCATCATGCA AGCGCTACGA 
TATTACCTTG CCTATAAACT TAGTTACCGT GAAATTGAGG AAATGTTCGC AGAGCGAAAC
ATTCATTTTG ACCACTCAAC ACTGAACCGC TGGGTTATCA AATATGCACC TCTGCTCGAA
GCCATATTCA GGAAGAAAAA GCGTCCAATA TCTGGCTCGT GGCGAATGGA TGAAACTTAC
ATAAAAATGA AGGGGCAGTG GGCTTACTAT TATCGTGCAG TGGATAAATT CAGCGCGGTG
ATTGATTTTT ACTTGAGTGA AACCCGTGAT GAGAAGGCCG CACACGCTTT TTTCACTAAA
GCTATCAATC AACATGGCTT ACCTGAGAAG GTGGTTATTG ATAAAAGTGG CGCCAATGCT
GCAGCGTTAG ATACTGTTAA CATTCGGCTG TGGCTATCAG GATGTATGCT CTTTATGATT
GAGGTGCTTA CCGTTAAATA TTTGAATAAT ATTGTCGAGC AAAGCCACCG AAAAGTGAAG
GGTAAAATTA ATGCCTAG
 
Protein sequence
MPLNFSGRHF PSDIIMQALR YYLAYKLSYR EIEEMFAERN IHFDHSTLNR WVIKYAPLLE 
AIFRKKKRPI SGSWRMDETY IKMKGQWAYY YRAVDKFSAV IDFYLSETRD EKAAHAFFTK
AINQHGLPEK VVIDKSGANA AALDTVNIRL WLSGCMLFMI EVLTVKYLNN IVEQSHRKVK
GKINA