Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_A0102 |
Symbol | |
ID | 1172525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004349 |
Strand | + |
Start bp | 82900 |
End bp | 84114 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637346552 |
Product | ISSod3, transposase |
Protein accession | NP_720429 |
Protein GI | 118725036 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAAGTGT TAACTATCTT ACATCAATCT CTCTATCAAC ATTGTCCAGA AATCCATCAA AAGCGACTGA ATACACTCAT GGTCGCCTGC AAAGCCCTCA TCAACGCGGA TTGTCTCACC CTCACGCATT TAGGGCGGCA CATTGATGGC ACCAGCACTC ATACTAAACA CTCAATAAAA CGCATGGATA GATTATTGGG CAACCCGCAC CTTCACCATG AAAGACTGGC TGTTTATCAG TGGCATGCAA AGTGGCTGCT AACAGCACAT ACGATGCCGA CCATACTGGT GGATTGGTCT GATATGCGTG AAGGTCGTGA ACTGATTGCA CTACGCGCCT CTATTGCGAT TAAGGGCCGC TCTATCACGC TCTACGAGCG AACATTTCCG TTAGTACTAC AAGGCACACA AACTGCCCAT AATCAGTTTC TGAATGAACT CCATAAAGTG TTACCTGACA ATATTACCCC GCTGATAGTC ACTGACGCGG GCTTCCGTAA TCCATGGTTT CGAAAAGTCG AGCAGCTCGG TTGGTATTGG CTGGGTCGTG TCAGAGGATT AAGTGTCTAT CGGCTGCACC CCTTCGGTCG CCAATTTTCG CTAAAAGCGC TTTATCCCAA AGCCAGTCGT CGCGCAAAAC ATGTTGGGCG AGTGGCGTTA TCGGTAAAGA AACCCTTGTT ATGCGAGATG GTATTGTTCA GGGCTCCAAG TAAAGGCAGA AAAGGTCAGC GAAGTACGAC AACAGACTGT CACCATACGG CGCAATGGAC GTATGAACTG ACCGCCAAAG AGCCTTGGGC ACTGGTGACC AACTTGACCA TAGAAGCCAT GTCGCCTCAA AAACTGGTTA ATATTTACCA AAAACGGATG CAAATAGAAG AAACCTTTAG AGATTTAAAA AGCCCCGCTT ATGGCTTTGG TTTACGTCAT AGCAGAACAC GTTATGCGGC GAGGATGGAC ATACTGCTAT TGATAGCATT ATTGGTACAA CTGGCATTTT GGTGGGTAGG ATTATACGGA GAAACACAGC AATTACAGCG GCACTTCCAA GCCAACACGG TAAAGAAAAG GAATGTGCTA TCAACAATCA GGATGGGCAA AGAACTGCTG CGGCGACGGC ATGACTACCC CATATCAGCA GATGATTTGC TTTGTGCTGC GAAGAAACTA GCCCAACTCT CATTAACTCA TGGTTGTTGG GGCTATGAAT TATGA
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Protein sequence | MQVLTILHQS LYQHCPEIHQ KRLNTLMVAC KALINADCLT LTHLGRHIDG TSTHTKHSIK RMDRLLGNPH LHHERLAVYQ WHAKWLLTAH TMPTILVDWS DMREGRELIA LRASIAIKGR SITLYERTFP LVLQGTQTAH NQFLNELHKV LPDNITPLIV TDAGFRNPWF RKVEQLGWYW LGRVRGLSVY RLHPFGRQFS LKALYPKASR RAKHVGRVAL SVKKPLLCEM VLFRAPSKGR KGQRSTTTDC HHTAQWTYEL TAKEPWALVT NLTIEAMSPQ KLVNIYQKRM QIEETFRDLK SPAYGFGLRH SRTRYAARMD ILLLIALLVQ LAFWWVGLYG ETQQLQRHFQ ANTVKKRNVL STIRMGKELL RRRHDYPISA DDLLCAAKKL AQLSLTHGCW GYEL
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