Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_A0048 |
Symbol | |
ID | 1172471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004349 |
Strand | - |
Start bp | 35916 |
End bp | 37844 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637346507 |
Product | prolyl oligopeptidase family protein |
Protein accession | NP_720384 |
Protein GI | 24376276 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.436282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTC ATTTATTTTA TAAAGAAGTT ATTGTGATAT TAAAAGTATT ATTGATTTCT ATATTTTTCA GTTTTTCCAT CCAAGCGGTG ACTATTAATG ATTTTTCCCG TCATCCTGAG TTTTATGATG TAAAAATATC ACCGGATGGG AAATACCTTG CCACATTAGT TAATACTGAA GGCCGTAAAA CTTTAGCATT TTTAGATAGT GACACTTTTA AGGTCATTTT TGCGCTGGGT GGAGACAAGC GCGATCAAGT TGCAGATTAC TACTGGGTCA ACAATGAACG AGTGATTGTG CAGGTTGAAC AGGTTAGAGG CTCATTAGAA AAACCATTAA ATTATGGTGA AATCTATGCT GTCAATTTTG ATGGTAAGAA AGGAGCAATG ATCTATGGTT ACCGAGCCAA AACACCGACA AGCAATGGCG GTTTTTTAGT TGATAACCTG AAAGGGGATG ATCAACATGT GTTAATCCGC TCTCAAGCTT TAAGTCGACG TACGGATGTG ATTCCAGAAA TTGTAAAGCT CAATATATAT TCAGGAAAAA CCCGTCGAAT CAAGCGTGCG CCTTTAGCTT ATAGTCAGTT TTTAATCGAT CATGCTGGAG TCCCGCGTTT TGTTGCAGGG ACTGATGATA AATTTACTAC GCAACTTTAC TATAGCAAAG GGCAAGGCGA TGATTGGCAA CTCTTTGGTG ATAAATTTGC AGGGGCATTT GAGCCAATCG CTTTTGCTGC GGATAATCAA AGTATTTATG CCTTAAAGAG CACAGATGAT GGACCAAAAG GCTTATATCA CTATGATTTA TCGACTAAAA AAGAAACTAA GTTATATCAA AGTGAGATGG TTGATCCAAC TTATGCTATC GGTAGTCAAT TGAATGAGGT ATATGGATTA CGGATAGATG AAGATTATCC TAATTACCTT TATCTCAAAC CTGACTCAGT CGACGCTAAG CTACACAAGT CCTTAGTCGA TGCTTTTAAT GGTGATAGCG TACTGGTTAG CAGTATCACT GAGGATGGTA AACAGGCTAT TGTGCATGTG AGTAGTGATC GCAATCCAGG TGATTTTTAT CTTTTTGATA CCACTCAAAT GAAAGCGCGC TTTTTAATGA GCAGTAGAGG CTGGATAAAT GCCAAGGAAA TGGCAGAAAC AGAACCTTTT AGAATCAAAA CAAAGGATGG TTTTACCTTA AATGGATTGA TGACTTTGCC TAAAGATAAA AAAACAAATT TACCTACAGT TATCTTGCCC CATGGTGGCC CACACGCTCG TGATTATTGG GGATTCGACC CATTAGTGCA AATGCTGGCT AATCAAGGTT TTGCTGTGGT GCAAGTGAAC TTTAGGGGCT CAACCGGTTA TGGTAAAAAC TTTGAAGAAG CGGGTTATGG AAAATGGGGC ACTAAAATTC AAGACGATAT AATGCTGGCA ACACAATATG CCATACAACA AGGTATTGCA GATGAAAATC GGATGTGTAT TTTAGGTATT AGTTTTGGTG GATATAGTGC TTTGCAGAGT GCGACTCGCT ACCCTGATAC CTTTAAATGT GCAATTGGTT ATGCTGGGGT TTACGATTTA GAAATGTTAT ATAACGAAGG CGATGTGAAA GATACCAGTT GGGGTGATGC TTATTTAGAT AAAACTCTCG GTACAGATAA AGCGGCATTA AAATCTCAAT CCCCTGTGCA TTTTGTCGAT ATGCTTAAGG CCTCAGTACT CATTATCCAT GGCGAAGAAG ATAAAAGAGC GTCTATTGAG CACGCTAACG CTTTAATGAA GGCATTAGAT AAAGCAAATA TCCCTTATGA GAAACTTATA AAAGACAAAG AAGGTCACGG ATTTTATAAG CAAGAAAATA TAGGTGAGGC CAATAAGAAA ATAGTTGATT TTTTAAATCG GAAAATTGGA TTTAAGTAA
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Protein sequence | MKIHLFYKEV IVILKVLLIS IFFSFSIQAV TINDFSRHPE FYDVKISPDG KYLATLVNTE GRKTLAFLDS DTFKVIFALG GDKRDQVADY YWVNNERVIV QVEQVRGSLE KPLNYGEIYA VNFDGKKGAM IYGYRAKTPT SNGGFLVDNL KGDDQHVLIR SQALSRRTDV IPEIVKLNIY SGKTRRIKRA PLAYSQFLID HAGVPRFVAG TDDKFTTQLY YSKGQGDDWQ LFGDKFAGAF EPIAFAADNQ SIYALKSTDD GPKGLYHYDL STKKETKLYQ SEMVDPTYAI GSQLNEVYGL RIDEDYPNYL YLKPDSVDAK LHKSLVDAFN GDSVLVSSIT EDGKQAIVHV SSDRNPGDFY LFDTTQMKAR FLMSSRGWIN AKEMAETEPF RIKTKDGFTL NGLMTLPKDK KTNLPTVILP HGGPHARDYW GFDPLVQMLA NQGFAVVQVN FRGSTGYGKN FEEAGYGKWG TKIQDDIMLA TQYAIQQGIA DENRMCILGI SFGGYSALQS ATRYPDTFKC AIGYAGVYDL EMLYNEGDVK DTSWGDAYLD KTLGTDKAAL KSQSPVHFVD MLKASVLIIH GEEDKRASIE HANALMKALD KANIPYEKLI KDKEGHGFYK QENIGEANKK IVDFLNRKIG FK
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