| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_A0044 |
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| Symbol | |
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| ID | 1172467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004349 |
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| Strand | + |
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| Start bp | 32496 |
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| End bp | 33626 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637346503 |
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| Product | phage integrase family site specific recombinase |
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| Protein accession | NP_720380 |
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| Protein GI | 24376272 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.374231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAGTA TTAAACTACA ACAGTCAATG ATAGATAATT TACCCACACC ACAGAAAATA
ACGGTGTTTT ACGATAAATA TTTTCCCGCT TTTTTTATGC GAGCCTATCC CTCTGGTATT
CGGTGTTATT ACGTTCGTTT CCAGTATCAA GGCTTGCGAC AACTTCATGT TATCGGCAAT
GCAAATGATA TCACGCTTGA TGATGCGCGA CTTGAGGCAA GAAAGCACAT AGATGCGTTA
CGTTATGGGG TGGTGAGTGA ACCTGTACCC TCCCTTACGC TCTGTGCGTT CGCTGAAGAG
TTTTTTCCAA GATATGCCCG TCATTGGAAG CCCTCGACAT TACTCAATAG CCAGCGTGGT
TTTACGCGGC ATATCGCCCC TGTGTTGGGT GATGTTCCGC TTGCAGCGTT GACACGACAA
CACATAGAGC AGTGGTTTGA TGGTATGCAT GCCTCGAAAG GCATGGCTAA TCGCTTGTTG
CCGTTGTTGT CGGTAATGAT GCAGCAAGCT GAAGTGTATG AGTATCGTCC AGCGCAAAGT
AACCCTTGCA AAGGCTTTAA GCGGTATAAA TCTACGCACA GTGAGCGTTA TTTATCTGAG
GAAGAACTCA AGCGGCTATG GTTGGCTTTA GATAGCCACG AAAAAGCGTC ACCCGTTGCG
GTGATGGTCT TACGGTTACT CATCCTGACG GGTTGTCGCT GTAACGAAGT GTGCTCCGTC
AAATGGGCTG ATTATCGGCA AGGGCATTGG TATTTGCCCG ACAGTAAAAC AGGCGCGAAA
ACGGTGTTTC TGTCTTCCTT TGCGCGGGAG TTGCTGAGTG ATTGGCCGCA AGTCAGCGAG
CATCTTTTTT GGCATCAATC ACCTTCACAG CCGTTTACTC CTGCTTGTTT AGACCGATTT
TGGCGGCCAT TTCGCGAGAC AATTCATCTA AATGATGTTC GCATCCATGA CTTACGCCAC
ACCTACGCCA GTATTGCAGT AAAGCACAAT ATCAACATCC TCACGATTGG CCGCTTATTA
GGGCATGCCT TGCCTGAAAC AACCTTAAAG TACACACACC TTGCTAAACG TGATGTTCAA
CAGGCGGCAA ATGTCGTTTC TCAACTCATT GCAGGGGAGA TGCAACGATG A
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| Protein sequence | MPSIKLQQSM IDNLPTPQKI TVFYDKYFPA FFMRAYPSGI RCYYVRFQYQ GLRQLHVIGN
ANDITLDDAR LEARKHIDAL RYGVVSEPVP SLTLCAFAEE FFPRYARHWK PSTLLNSQRG
FTRHIAPVLG DVPLAALTRQ HIEQWFDGMH ASKGMANRLL PLLSVMMQQA EVYEYRPAQS
NPCKGFKRYK STHSERYLSE EELKRLWLAL DSHEKASPVA VMVLRLLILT GCRCNEVCSV
KWADYRQGHW YLPDSKTGAK TVFLSSFARE LLSDWPQVSE HLFWHQSPSQ PFTPACLDRF
WRPFRETIHL NDVRIHDLRH TYASIAVKHN INILTIGRLL GHALPETTLK YTHLAKRDVQ
QAANVVSQLI AGEMQR
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