| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_A0031 |
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| Symbol | |
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| ID | 1172626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004349 |
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| Strand | + |
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| Start bp | 22779 |
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| End bp | 24653 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637346490 |
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| Product | ParB family partitioning protein |
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| Protein accession | NP_720367 |
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| Protein GI | 24376259 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.264156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAACT CAATTCAAGC GCAAGCAACT CACACTAAAG CCACCACTTT ACCTGCCAGC
CCAAAGACTC AAGCAGGCTC TCACAAGCCC GATATTGCTC AAAAATCGGC AACAGCGGCT
AACGCTGTGG TGGCATTGGC TTCAACAGCA AAGCCAGTGT TACTGCAATT GCAGATTAAC
CAGTTGGTGT TGTCTGAGAA GAACGTGCGT AAAGAAAATG CGTCCAAGGC TGACGATGAA
CAGTTGTATG CCTCCATTTT GGCGCATGAC ATTTTACAAA ATCTGATCGT CGAGCCCATG
AACGCGCAAG GCTTATACCC TGTGTTGGGC GGTGGCCGTA GACTGAGACA GCTCATTAAA
GCCGTCAAAA ATAATAAGCT GAAACCGAAA ACGCTTGTGC CTGTTAAGTT GCTGACAGCC
GAAGATGTGG CCAACTATGC CACCGAGCTA TCTATGACTG AAAACTTCAC GCGCGCCAAG
ATGCACCCAG TCGATGAATT TCACGCTTTT GCTGACATGG TGAATAAGGG CGCTAGCATT
GCTGATGTTG CGGCGCGGTT TGGCGTGACT GCGAAATTCG TGCAGCAGCG CATGAAATTA
AGCATGGTCG CCCCTGTTGT GCTCGATGCG TACAAAGCGG GGAACGTGTC GCTTGATGTC
GTGATGATAT TCACGATTGC CAGTGTCGAA AAACAAGTCG AAGTGTGGGA GCTGGCAGGC
GATAGACGTT ACAACGAAAA CCAGTTCCGC AATATGCTTA AAGACGCCGC TGTGAATGCT
GATCACTATT TGGCTCAGTT TGTTGGCCAA GAAGAATACG AAAAAGCGGG CGGGGTTGTG
ACCTCAGACT TGTTCAGTGA TGAAGTCTAT CTTGATGATA AAGCGTTACT CGAATCATTA
GCGATTGCAA AATTGGAGTT AGAAGGGGCA AAACTGGTTA TGCAAGGCTG GAAATGGGCA
GATTATAAGC TCGTATCTGA ATACGATGAA CTTGCAGGGT TTGGACGTCT TACCTTAAAA
GAAGGGGAGT ATGATCCCGC TGAAATGGCG CTAGCGGGGT GTTTGCTCGT GTTAAAAAGT
TATGGTGAGC CTGTCAGTAT CTATATGGGC TTGGTGCATA AGGACGATAA AAAGGCACTG
GCACAATTAC AAGCCAGCGT GCAATCAGAC CCACTCAACG TGGGTGACGT GAAAAAAATT
GAAGAAAAGG ATACTAGCGG TTATTCCGCT GCGCTCAATG ACGATTTACG GGCGCAGCGC
CTGATTATCG CTAAACATGC GTTAATGAGT GCGCCAAGCG TTGCGCTTGA TACGCTGCAT
TTCTCTGTCT GTGTAAGCGC GTTCACTGAC TCACGTTATG GCAGCCGTCC ACTGCATATC
AGCGTTAACG ACACCACTTG TCATCCTAAA ACGGGATCGC TCACGGATAA CAAAGCGGTG
CAGTTAATCG AGGGTGTAAA AGCCAGCCTA AATTTAGCGT GGGTTGGTCT GCCAACGGTC
GCTGAACGCT TTAACGCTTT TTGCGCCCTC GATGTAAAAG AGAAAGAAAA GCAGGTGGCT
TACGCCACGG CTTCCATGTT CGAGGCGTCA ATTGATAATA GTCATCAAGC GGTTGAGGCC
GTGATATCTA CGCTCGATGT GAAATGGTCT AACTACTGGC GACCGACTGC GGAAACCTTC
TTTAAGCGCG TGAGCTTGTC TTGTCTAATT GATATGGCTC AGCCTGTCAT GGGTGAGCAG
TGGGCATTAC AAGCCGCCGC ACTCAAGAAA AAGGACTTAG CAAATCAGGT TGATAGCTTA
GTGAACGGGG AGCGAAAAGG GCTAGATGAT GCACAAAAAG CCTACTTTGA TGCCTTGATG
CCCGCTGGAT TTTAA
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| Protein sequence | MTNSIQAQAT HTKATTLPAS PKTQAGSHKP DIAQKSATAA NAVVALASTA KPVLLQLQIN
QLVLSEKNVR KENASKADDE QLYASILAHD ILQNLIVEPM NAQGLYPVLG GGRRLRQLIK
AVKNNKLKPK TLVPVKLLTA EDVANYATEL SMTENFTRAK MHPVDEFHAF ADMVNKGASI
ADVAARFGVT AKFVQQRMKL SMVAPVVLDA YKAGNVSLDV VMIFTIASVE KQVEVWELAG
DRRYNENQFR NMLKDAAVNA DHYLAQFVGQ EEYEKAGGVV TSDLFSDEVY LDDKALLESL
AIAKLELEGA KLVMQGWKWA DYKLVSEYDE LAGFGRLTLK EGEYDPAEMA LAGCLLVLKS
YGEPVSIYMG LVHKDDKKAL AQLQASVQSD PLNVGDVKKI EEKDTSGYSA ALNDDLRAQR
LIIAKHALMS APSVALDTLH FSVCVSAFTD SRYGSRPLHI SVNDTTCHPK TGSLTDNKAV
QLIEGVKASL NLAWVGLPTV AERFNAFCAL DVKEKEKQVA YATASMFEAS IDNSHQAVEA
VISTLDVKWS NYWRPTAETF FKRVSLSCLI DMAQPVMGEQ WALQAAALKK KDLANQVDSL
VNGERKGLDD AQKAYFDALM PAGF
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