| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_A0013 |
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| Symbol | rulA |
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| ID | 1172609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004349 |
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| Strand | - |
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| Start bp | 11335 |
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| End bp | 11739 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637346475 |
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| Product | SOS mutagenesis protein RulA |
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| Protein accession | NP_720352 |
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| Protein GI | 24376244 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTGTTA TTCCTATCCC AGCTCAAGCG GGTATTACCG GCTTTGAAAG CCCCGCAGCT
GAATATACTC AGCTTGGGCT TAGCCTTGAT GAATTGCTGA TCATCCATCC TAGTGCCAGT
TTTTTATGCG TGGCGCAGGG AGACTCGATG CAAGGTGTAG GGATTTATGA TGGTGATGTC
TTAATCGTTG ACCGCCATGA GACCGCCCGC AATGGTGATG TGATAGTCGC TAATTTTAAC
GGCCTGTTTG TCTGTAAGAT CATCGACACC CAAAGGCGTT TGCTGTTGTC ATGCAATGAA
CAATTTCAGC CGGTCACAGT ACAAGAATTC GATGATTTTA GTATTGAAGG CGTGGTTATC
CGCTCGATTC GTTGTCACCG CCCTAGTTCG TTACTGTGTG CTTAA
|
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| Protein sequence | MRVIPIPAQA GITGFESPAA EYTQLGLSLD ELLIIHPSAS FLCVAQGDSM QGVGIYDGDV
LIVDRHETAR NGDVIVANFN GLFVCKIIDT QRRLLLSCNE QFQPVTVQEF DDFSIEGVVI
RSIRCHRPSS LLCA
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