| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_A0004 |
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| Symbol | |
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| ID | 1172600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004349 |
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| Strand | - |
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| Start bp | 3938 |
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| End bp | 5650 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637346466 |
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| Product | type II DNA modification methyltransferase |
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| Protein accession | NP_720343 |
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| Protein GI | 24376235 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.606152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTATGA GTAGAGATTG TATTTTGGAT TCAACTGTAG ATAGATACCA ACACGTGGGA
TGTAGAAAAA GTGAAGGCGC TCATTATACA CCTACAAGAC TTAGTCAATT TGTTAGCGAA
AAGATAATAG AAAAACTTAA GAAAAAAGAA AGTATTGTTA TTGCAGATCC TGCTATCGGT
GATGGTGAGT TAATTCTCAG TTTTTTATCC TCTCTAGATT CAACTGATAA TATTGAAGTT
ATTGGTTTCG ATATTAATCT AGAATCAATT GAACTAAGCA AAAAAAGAAT TTTAAACTTT
TACCCTAATG TAAGGATAAA TTTAATTCAC GGTGATTATT TGGATTATTG CATTAATGGT
AATTCAGATT TGTGTGAGTA TAAATTACCA AAATTTGACG CAATTATTGC TAACCCACCA
TATGTAAGAA CTCAAGTGTT GGGAGCTGAA CAATCTCAAT TTTTATCTAA AAATTTTGGA
TTAAAAGGCA GAGTTGATAT ATATCAAGCA TTTCTTATTG GTATGAGCAA GTGTTTGTCG
GAAGATGGTG TTGCGGGAGT TATAGTTTCA AACAGATTTT TAACAACCAA AGGAACCGGA
GCACTAAGGC AATCTCTACA CGATTTATAT GATATATATA ATATTTGGGA TTTTGGGGAC
ACAAAGTTGT TTGAAGCTGC TGTTTTGCCT GCAGTTCTGT TATTTAAAAT GAAAGCTGAA
AAACCTGATT TTTCGACAGA GTTTCGCTCT ATTTATGAAA CAAATGAAAA TGAAGTTGAT
TTTGCCGAAA CACCAGTTGA TGCAATTTCA TTGGATGGTG TTGTAAGGTG TTCTAATGGT
AAGAATTACC TTATAAAGGC AGGACTTCTT GATTATGATT CATCACCAAA AGATATTTGG
AGGGTGAAAG ATCTTACTTC TGAAAAGTGG TTGGATGATG TTTATAGAAA AACATGGGCA
ACTTTTGGTG AAGTAGGTAA AATTCGAGTT GGCGTAAAGA CTACGGCTGA TAACGTTTTT
ATCAAAAGTT CTTGGATTGA TGAAACAGGG CTAGTACCAG AGCTTATTAG GCCGTTGATT
ACACATCATG TAGCTGAAAG GTTTAAGCAA TCAGATGCAG AAACAAAATA TATCCTTTAT
ACACATGAGA TGGTGAATGG TAAGAGGAAG GCTATCGATA TTGATAAATA CCCAATCAGC
AAAATGTACC TAGAGCAACA TAGAGTACAG CTTGAAGGAC GTAATTATGT AATTGAGGCT
AATCGTAAAT GGTTCGAAAT ATGGGTTCCT CAAAGTCCTT TACTATGGGC AGAAAATAAA
ATTGTATTCA GAGATATTTG TGAAGAGCCA ACATTTTGGC TAGATAACAA GCAATCTATC
GTTAACGGAG ATTGTTATTG GATGGTTAAT GACTACAAAA AAGAAGAAAC AGATCTTCTT
TGGTTAGTTT TGGCTGTAGC AAACTCAAAG TTTATAGAAT ATTTTTACGA TATAAAGTTC
AATAATAAGT TGTACTCTAA TAAAAGACGT TTTATATCAC AATATGTTGA GCAGTTTCCG
CTTCCAGATC CAAAATCTGT AATCTCAGTA AAAATGATCA TGTTAGCTAA ATCTATTTAT
AACTGTACAG ATAAACAAGA AAGGAATGAA AGTGAAAAAC TTTTAGATGA TCTGGTTTGG
GAGGCATTTG ACCTCCCTTG TCCAATATTT TAA
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| Protein sequence | MTMSRDCILD STVDRYQHVG CRKSEGAHYT PTRLSQFVSE KIIEKLKKKE SIVIADPAIG
DGELILSFLS SLDSTDNIEV IGFDINLESI ELSKKRILNF YPNVRINLIH GDYLDYCING
NSDLCEYKLP KFDAIIANPP YVRTQVLGAE QSQFLSKNFG LKGRVDIYQA FLIGMSKCLS
EDGVAGVIVS NRFLTTKGTG ALRQSLHDLY DIYNIWDFGD TKLFEAAVLP AVLLFKMKAE
KPDFSTEFRS IYETNENEVD FAETPVDAIS LDGVVRCSNG KNYLIKAGLL DYDSSPKDIW
RVKDLTSEKW LDDVYRKTWA TFGEVGKIRV GVKTTADNVF IKSSWIDETG LVPELIRPLI
THHVAERFKQ SDAETKYILY THEMVNGKRK AIDIDKYPIS KMYLEQHRVQ LEGRNYVIEA
NRKWFEIWVP QSPLLWAENK IVFRDICEEP TFWLDNKQSI VNGDCYWMVN DYKKEETDLL
WLVLAVANSK FIEYFYDIKF NNKLYSNKRR FISQYVEQFP LPDPKSVISV KMIMLAKSIY
NCTDKQERNE SEKLLDDLVW EAFDLPCPIF
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