| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4742 |
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| Symbol | |
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| ID | 1172319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4953274 |
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| End bp | 4954044 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637346447 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | NP_720258 |
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| Protein GI | 24376214 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAAC GAAATACACA GCAACGACGC CACAGCATTA TCAGCATTCT GAATGAACAG
GGTGAAGTGA GTGTCGATGA GTTGTCATTA CGTTTCGAAA CCTCTGAAGT CACCATTCGT
AAAGATCTGG CCGAACTTGA AAAAACCGGA TTACTGCTGC GCCGCTATGG CGGTGCTGTG
GCTATTCCTG ATGAAGTCAC GCAACAGTTT TCTGCCAAGA TTGCGCCTAA CAAGTTATCC
ATTGCTAAAG CTGCCGCGCA GCTCATTAAA GATCACAATC GCATCATTAT CGATAGCGGT
ACCACCACCT CTGGCTTGAT TGCTGAACTA AACCAAAAGC GTGGGCTGGT GGTGATGACC
AATGCCCTGC ATTTGGCTAA TGCGATTCAC GAGCTTGAAA ACGAGCCAAC CTTATTGATG
ACCGGTGGAA CTTGGGACCC GCATTCTGAA TCCTTTCAAG GCCAAGTCGC CGAGCAAGTA
TTACGCTCCT ACAACTTCGA CCAACTGTTT ATCGGTGCCG ACGGTATCGA TTTAGCCCGT
GGCACCACCA CCTTTAATGA GCTGACAGGT TTAAGTAAGG TGATGGCTGA GGTTTCCCGC
GAAGTTATCG TAATGGTGGA TTCGGACAAA ATTGGCAAGC GGATCCCTAA TTTAGAATTG
CCATGGTCGA AAATTAGCGT GTTAGTCACC GATGCGCGCA TCGAAGAGAG CGCCCTTAAG
CAAATTACCG AGCAAGGCGT CAAAGTCATC TTAGCGCCCT ACTCGCCTTA G
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| Protein sequence | MNKRNTQQRR HSIISILNEQ GEVSVDELSL RFETSEVTIR KDLAELEKTG LLLRRYGGAV
AIPDEVTQQF SAKIAPNKLS IAKAAAQLIK DHNRIIIDSG TTTSGLIAEL NQKRGLVVMT
NALHLANAIH ELENEPTLLM TGGTWDPHSE SFQGQVAEQV LRSYNFDQLF IGADGIDLAR
GTTTFNELTG LSKVMAEVSR EVIVMVDSDK IGKRIPNLEL PWSKISVLVT DARIEESALK
QITEQGVKVI LAPYSP
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