Gene SO_4727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4727 
Symbol 
ID1172306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4932064 
End bp4932702 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content42% 
IMG OID637346431 
Producthypothetical protein 
Protein accessionNP_720243 
Protein GI24376199 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAGAT GCCCTCTTTG TCATAGCACG CAAACACACT TGCTCCTACA GGACAAAAAA 
CGGTGTTTTT ATATTTGCCA GACATGTTGG CTAACCTTTG CCGATGCGAA TAGTCATCTT 
CCACCAGCTG CAGAAAAACA GCGTTATGGC CGATCACGCA TCGCGTCAAA GCAACGCCAC 
CTCTCGCAAT TTATTTTGCC TTTGCTTACG CAAATACAAC AGCAGCAAAA TGGTAGCCTC 
ACGGGATTGA ATTTTGGACG AGTGTTAGAT CAAACCAGCC TAGAGACCAT TGAATCTGCG 
GGGCACACTT TCAAACAGTA TGACCCTTTC TTTGCTCCTG ACCACGAAAC ACTCAAGCAA 
GAGTATGATT TTATTTGCTG CTACCGAGTG TTTGAGCATT TTCAGTATCC CATAAAAGAA 
TGGAGCTTAC TGACCCGCTT ACTTAAACCA GGCGGATGGT TAGCAATAAG TACTCCTTTA 
TTAATTGATT TAGAAGGCTT TGCTAAGTGG CACTATAAGA ACAACCTCAC CCATGTGAGT 
TTTTACCAAC GACAAACTTT TGAATACCTA GCAAGCAATA GTGATTTTGA ACTATTATTT 
GCCGCTAAGG ACCTCGTTTT GATGCAAAAA ACATCATAA
 
Protein sequence
MRRCPLCHST QTHLLLQDKK RCFYICQTCW LTFADANSHL PPAAEKQRYG RSRIASKQRH 
LSQFILPLLT QIQQQQNGSL TGLNFGRVLD QTSLETIESA GHTFKQYDPF FAPDHETLKQ 
EYDFICCYRV FEHFQYPIKE WSLLTRLLKP GGWLAISTPL LIDLEGFAKW HYKNNLTHVS 
FYQRQTFEYL ASNSDFELLF AAKDLVLMQK TS