Gene SO_4675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4675 
Symbol 
ID1172257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4873469 
End bp4874116 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content43% 
IMG OID637346382 
ProductTetR family transcriptional regulator 
Protein accessionNP_720190 
Protein GI24376147 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCC GCGACAAAAT TATTTACGCC AGCCTTGAGC TATTCAATGA ACATGGCGAA 
CGAAATATCA CCACCAATCA TATTGCCGCT CACATGAATA TGAGTCCCGG GAATCTTTAT 
TATCACTTCC GTAATAAGGA AGATATTATT CGCTCGATTT TCAGTCTCTA CGAGGCGCAC 
CTCGAATCGG GTTTTCAGCC CTATGAGGGC GAGCAAGTCA ATGTAGAGCA ACTGATCGGC 
TATTTTGATG CGATGTTTTA CACCCTGTGG CAATTCCGTT TTATGTACGC CAATTTGGCC 
GATATTCTGG CCCGAGATGA AGAATTGAAG AGTCGTTATC TACATGCTCA GCAGCAAGTG 
CTAACACGCT CGAGTCACGT GCTCGGTAAA CTCAAGCAGG ATGGTTTTTT AAATATCGAT 
AACGATAAAA TCACCGCACT TGCCGATACT ATCAAGATGA TTGTGAGTTT TTGGATTGGT 
TATCAACTTA CCCAATCAAG CACTTCCACC ATCACTAAAG GCATTTTGTA CGAAGGGGTA 
TTGCGGGTAT TGATGATTTT TAAAGCTTAT GCCACGCCGA CATCCCAAGC GACCTTTAGT 
CGCCTAGAAC AACATTATCA TGAGCTCGCT ACTCAAGAAT CTCTCTAA
 
Protein sequence
MKTRDKIIYA SLELFNEHGE RNITTNHIAA HMNMSPGNLY YHFRNKEDII RSIFSLYEAH 
LESGFQPYEG EQVNVEQLIG YFDAMFYTLW QFRFMYANLA DILARDEELK SRYLHAQQQV 
LTRSSHVLGK LKQDGFLNID NDKITALADT IKMIVSFWIG YQLTQSSTST ITKGILYEGV 
LRVLMIFKAY ATPTSQATFS RLEQHYHELA TQESL