Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4478 |
Symbol | cpxA |
ID | 1172073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4665827 |
End bp | 4667176 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637346194 |
Product | sensor protein CpxA |
Protein accession | NP_719999 |
Protein GI | 24375956 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCTAATC GCTTATTTAT CAAGTTACTG CTCGGATTTT GGCTCTGTAG TTCGCTGATT ATCGCCTTAG TTGGTTTGCT GCCCCTGCTG CAACAAAATC ACGATCGCGC CCCTATTCCG CCCCATCTGC AAAAAGTGCT AGCGACCATA GCGCAGCGCA TTCAGGAAAA TCCAACACTG CTTAAGTCTG ATTTCCTGCG CCGTTGGGAA AGGCATCGAG ATATGGAAGG CAAACCACTA CGGCTTTACC TGACCAACAG CCAAGGGCAA GTGATAAACA CTAATAGAAT CAGCCGTGGT GTGCGCAGTT TTATGCTGAT GGCTGATGAA GAAAAGCAGC CAATTAGTCA TCAATTTAAA GATGAATTAG TATTTGGCCC TTACCAATTT ACCCTTGAGG GTGAAACCTA TTTCCTCTAT GGTCGACTAC CAGATACCCA TCCTAGGCCT TGGTTCTTCT TCTTTATAGA AAACAAACTG CTCACCCTCA GCTTAGCCAT TTTGCTCTCG GGGTTACTCT GCGCTCTACT CGCTTGGCAT CTAGGTAAGC CACTCCGTTC ACTTAAAAAA AGTGCCGACG CCCTCGCCGA AGGTGATCTT AGCAACCGAG TCGATAAAAC AACCACTCAA CGTAATGATG AAATTGGCCA ACTCGCCACC GCGTTTAACA GCATGGCGGA CTCGATTGAA GCCATGGTCA AAAATCAACA GCGATTAATG GGGGATATTT CCCACGAGCT GCGCACACCG CTGACCCGCC TGCAACTGTC ATTGGCGCTG GCCCGTAAAA AAGGCCAACA AACCACAGAA ACCGACCGCA TCGCCTACGA AGCTGAGCAA TTAGAGCAAC TGATTGCCGA GCTGCTGGAG CTATCACGGG TCAAACTCAG CACCAATGAA ACTAAAGTAT GTCTCGGTTT AGCCGAGTCG CTAAGCCAAG TATTGGATGA CGCCGAGTTT GAAGCCGATC AGCAAGGTAA GAAGATCACT ATCGATATCG ATGAAGCCAT CGAACTCAGC CATTATCCTA AGTCCCTGTC CCGTGCGATA GAAAACCTGC TGCGCAACGC GATTCGTTAC GCCAAGAGCG ACATTCATCT GCACGCGAGT CAAACAAGTG GCCAAGTCCA AATCACGATA AAGGATGACG GTCCTGGTAT TGATCCTGCG GAGCTTGAGT CAATTTTCAA ACCCTTCTAT CGCCCAGACT CCGCAAGACA GCGGGAAAGT GGTGGTTGGG GGCTAGGGTT AGCAATTACT GAAGCCGCGA TTAGCGCCCA TAAAGGTAAG ATAAAAGCCG AAAACCGTGA GCCACACGGC CTTGAAGTCA ATATCAGTTT ACCCACCTAA
|
Protein sequence | MPNRLFIKLL LGFWLCSSLI IALVGLLPLL QQNHDRAPIP PHLQKVLATI AQRIQENPTL LKSDFLRRWE RHRDMEGKPL RLYLTNSQGQ VINTNRISRG VRSFMLMADE EKQPISHQFK DELVFGPYQF TLEGETYFLY GRLPDTHPRP WFFFFIENKL LTLSLAILLS GLLCALLAWH LGKPLRSLKK SADALAEGDL SNRVDKTTTQ RNDEIGQLAT AFNSMADSIE AMVKNQQRLM GDISHELRTP LTRLQLSLAL ARKKGQQTTE TDRIAYEAEQ LEQLIAELLE LSRVKLSTNE TKVCLGLAES LSQVLDDAEF EADQQGKKIT IDIDEAIELS HYPKSLSRAI ENLLRNAIRY AKSDIHLHAS QTSGQVQITI KDDGPGIDPA ELESIFKPFY RPDSARQRES GGWGLGLAIT EAAISAHKGK IKAENREPHG LEVNISLPT
|
| |