| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4477 |
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| Symbol | cpxR |
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| ID | 1172072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4665126 |
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| End bp | 4665812 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637346193 |
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| Product | transcriptional regulatory protein CpxR |
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| Protein accession | NP_719998 |
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| Protein GI | 24375955 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTCGGA TACTATTAAT CGATGATGAT CTCGGTTTAT CGGAACTTCT TGGGCAACTT
CTCGAACTCG AAGGGTTCAA ACTCACATTG GCCTACGACG GCAAACAAGG TTTAGAACTT
GCTTTGGCTA CAGATTACGA TTTGATCTTA CTCGATGTAA TGCTGCCTAA GTTAAACGGC
TTTGAAGTGT TACGCGCTCT GCGGCAACAC AAGCAAACTC CAGTGCTGAT GTTAACCGCC
AGAGGTGATG AGATTGACCG CGTAGTAGGC CTTGAAATCG GCGCCGATGA CTATTTACCT
AAGCCCTTTA ATGACAGAGA ACTTATCGCC CGAATTCGCG CCATCATTCG CCGCTCCCAT
TTAACCGCCC AAGAAATCCA TGCGACACCG GCACAGGAGT TTGGTGATTT ACGTTTAGAC
CCTTCACGCC AAGAAGCCTA TTGTAATGAG CAACTTATTA TCCTCACGGG CACAGAATTT
ACTCTGCTGC ACACCTTAGC ACTCCATGCT GGCGAGTTGA TGAATAAAGA AGAACTCAAT
GAAATTGTGC TAGGTAAAAA ATTGATGCCA TTCGATCGCA GTTTAGACAT GCATCTGTCG
AATCTACGCA AAAAACTTCC CGAGCGTAGC GACGGCAGAC CTAGGGTGAA AACTATTCGT
GGCAAAGGCT ATATCTGGTT ACCATAA
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| Protein sequence | MSRILLIDDD LGLSELLGQL LELEGFKLTL AYDGKQGLEL ALATDYDLIL LDVMLPKLNG
FEVLRALRQH KQTPVLMLTA RGDEIDRVVG LEIGADDYLP KPFNDRELIA RIRAIIRRSH
LTAQEIHATP AQEFGDLRLD PSRQEAYCNE QLIILTGTEF TLLHTLALHA GELMNKEELN
EIVLGKKLMP FDRSLDMHLS NLRKKLPERS DGRPRVKTIR GKGYIWLP
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