| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4427 |
|---|
| Symbol | |
|---|
| ID | 1172024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 4617831 |
|---|
| End bp | 4619087 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637346145 |
|---|
| Product | sensor histidine kinase |
|---|
| Protein accession | NP_719948 |
|---|
| Protein GI | 24375905 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTGTGA TCATAGGCGC TTTGCTGTTT GCTCTCTATC GGCAATTGAT TATCGAGCAG
CAGTATCAAG TCACTCAATA TCTTGAGTCA GAAACTCAGC GTTATCAGCA GCTTGCGCTT
ACAGTCGATC GCCGCAGTTT TGCGGCACAA ATTCGTGCCG CCGATCCGCA AACCGCGCTT
ATCGCTTGGC GCAATAGTTA CGATATGGTC GGTGCTTTAA GCTTTATGCC CGAAGGCATG
CCCATGCTGC CACAAACGCG GGATTTTCCG ATATTAACCG GTGGGCCAGA TAAGCTGCAT
ATTCTTACCG GTGGTCTGGT AATGACCCGC TATGGCCCCG TCTTGATTGC CACTCGTACC
GATAACTTAG CTACTCTTAT CGATAAATTT ATCAGCGCGG CAGCCACTGC CGTGATGTTG
ACTATCGTGC TGACCTTGGC GTTGGGCTAT TTGTTTTCTA AGGCAATTTT ACGCCGTTTA
GTGCAATACA ACCGTTTAAG TGAGCAAATT GAGCGCGGAC ATTATGACAC GCGTTTGCCA
CTCAGTTGGC GTCAGGACGA GTTCGATATG TTAGCGCTGC AATTTAATAA CGTGCTGGAT
ATTCTCGAAA ATAACCTGAT GGCGGTACGT GGTGTGACAG ATAATATCGC CCACGATTTA
CGCACACCCT TATCCCATAT CCGGATTGGT ATTGAGGAGT TGGCGACCAA GTCCCCCGAT
GAAATTAGCG AAGGTTGTGC GATTTTGACC GAAGAACTCG ATCACTGTCT TGCGACTTTT
GATGCCATGC TCTCCCTCAC ACGGATTGAG GAGGGTCAGC AAACCTTAGA TTTACAAGAG
CTGAGTTTGG CCCAGCTCTG CACGGATTTG CTGGAAATGG CCGATGCGGT AGCTGAGTCG
AATGAGCAAA CCTTGAGTCT GTCGCTACTT GCTGATCATA AAGTTCATGG CGATAAATAT
TTGTTATTCC AAGCCTTATA TAATTTGGTT GACAATGCTA TGAAGTACTC AGGCCAAGGC
GCTCGTATCG ATATTATTCA GTCCGGCGCT CAAATTAAGA TTTGCGATAA TGGCCCAGGG
ATCCCCGATG ACAGCAAAGA AAGAGTGTTT GAGCGTTTAG TTCGCCTCGA CCCAAGCCGC
CATTTGCAAG GCACAGGTTT AGGATTATCT ATGGTCAAAG CCATTCTATC GCGGCACAAT
GCGCAGATTA CTCTTTCGGA TAACCATCCT GGCCTTGTGG TCACTATCCA GTTTTAG
|
|---|
| Protein sequence | MTVIIGALLF ALYRQLIIEQ QYQVTQYLES ETQRYQQLAL TVDRRSFAAQ IRAADPQTAL
IAWRNSYDMV GALSFMPEGM PMLPQTRDFP ILTGGPDKLH ILTGGLVMTR YGPVLIATRT
DNLATLIDKF ISAAATAVML TIVLTLALGY LFSKAILRRL VQYNRLSEQI ERGHYDTRLP
LSWRQDEFDM LALQFNNVLD ILENNLMAVR GVTDNIAHDL RTPLSHIRIG IEELATKSPD
EISEGCAILT EELDHCLATF DAMLSLTRIE EGQQTLDLQE LSLAQLCTDL LEMADAVAES
NEQTLSLSLL ADHKVHGDKY LLFQALYNLV DNAMKYSGQG ARIDIIQSGA QIKICDNGPG
IPDDSKERVF ERLVRLDPSR HLQGTGLGLS MVKAILSRHN AQITLSDNHP GLVVTIQF
|
|---|
| |