Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4417 |
Symbol | dcuB |
ID | 1172014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4609208 |
End bp | 4610551 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637346137 |
Product | anaerobic C4-dicarboxylate transporter |
Protein accession | NP_719940 |
Protein GI | 24375897 |
COG category | [R] General function prediction only |
COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTAA TGGAATTTAT TGTCGTACTC GGCTGTTTGC TGCTGGGCAC CCGCTATGGG GGCATGGGCC TCGGGCTGAT TAGTGGTATT GGCTTGTTTT TACTGACGTT TGTCTTTGGC CTTGCCCCCG GACAACCGCC AGTGCAAGTG ATGTTAACCA TTCTTGCAGT TATCGGCTGT GCTGCAGTAT TGCAAACCGC GGGCGGCTTA GATGTGATGA TGCAGTTTGC CGAACGCTTA CTGCGCCGCC ATCCGCAGTA CATTACCATT CTGGCACCAT TAACCACGTG GACACTGACC TTTTTGTGCG GTACGGGCCA TGTGGTTTAC ACCATGTTCC CGATTATCTC TGATATCGCC TTGAAGAAAA ACATTCGTCC AGAACGCCCG ATGGCTGTTG CCTCGGTCGC ATCGCAAATG GCAATTTGTG CTTCGCCCGT ATCGGTTGCC GTCGTTTCTA TGGTATCGAT TTTGGCGGCG CAGCAGGGCG TCGGTCATGC CTATAGCATG CTGGAAATTT TAATGGTGTC CGTTCCCGCA TCCCTTTGCG GTGTGTTAGT GGCAGCACTG TGGAGCCTGC GTCGTGGCAA AGATTTAGAT AAAGACGAAG AGTTTCAAGA ACGAATTCAA GATCCGGTGC AAAGAGCCTT TATCTACGAC AAGGGCGAAA CGCTGCTCAA TCAAACCTTC CCCAAGCAAG CGTATTGGGC AACGGGGATC TTCTTTGCCG CTATCGCCGC CGTGGTATTA CTCGGCTCCT TTAGCGAGTT GCGCCCAGTA TTTGAAGAGA AAGGCAAGCT AGCGCCACTG TCGATGAATC TGGTGATCCA AATGATGATG TTGATCGCGG GCGCCTTTAT CTTGATGAGC TGCAAAGTCA AACCGGCTGA GATTGCCAAT GGTCCGGTTT TTAAAGCGGG TATGGTGGCG ATTTTCTCGG TATTTGGCGT GGCATGGATG AGCGATACTT TCTTTATCAG CCATATGGAT GTACTGAAGG AAAACCTCTC CCACGTGGTG CAAAACCAGC CTTGGACCTA TGCCCTAGTG CTGTTTTTAA TATCTAAACT GGTCAACAGC CAAGCGGCTG CGCTCACCGC AATCGCACCG ATGGGATTGG CTTTAGGCGT AGATCCTAAG CTGTTAATTG CTTTTTTACC CGCCAGCTAT GGCTACTTTG TGCTGCCAAC TTATCCAAGC GATTTGGCCT GTATCGGTTT CGACCGTTCT GGCACCACTA AAATTGGTAA GTTCATCATT AACCACAGCT TTATTATCCC AGGGCTGATT GGTGTTGGTA CCGCATCAAC TGTCGGTTAT CTGCTGGCAA CTGCGCTACT GTAA
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Protein sequence | MILMEFIVVL GCLLLGTRYG GMGLGLISGI GLFLLTFVFG LAPGQPPVQV MLTILAVIGC AAVLQTAGGL DVMMQFAERL LRRHPQYITI LAPLTTWTLT FLCGTGHVVY TMFPIISDIA LKKNIRPERP MAVASVASQM AICASPVSVA VVSMVSILAA QQGVGHAYSM LEILMVSVPA SLCGVLVAAL WSLRRGKDLD KDEEFQERIQ DPVQRAFIYD KGETLLNQTF PKQAYWATGI FFAAIAAVVL LGSFSELRPV FEEKGKLAPL SMNLVIQMMM LIAGAFILMS CKVKPAEIAN GPVFKAGMVA IFSVFGVAWM SDTFFISHMD VLKENLSHVV QNQPWTYALV LFLISKLVNS QAAALTAIAP MGLALGVDPK LLIAFLPASY GYFVLPTYPS DLACIGFDRS GTTKIGKFII NHSFIIPGLI GVGTASTVGY LLATALL
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