| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4373 |
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| Symbol | |
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| ID | 1171975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4566149 |
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| End bp | 4567933 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637346099 |
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| Product | glycosyl transferase, group 2 family protein |
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| Protein accession | NP_719897 |
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| Protein GI | 24375854 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG4261] Predicted acyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCCAG TCCCAATAAA GCTGGCGCTG GTGATCCCCA ATTACAATCA CAGTGCCGCC
ATCAGCCAAG CCTTATCCGA GCTTGCCGCC CTCAATCTGC CCTGCTATTT GATTGACGAT
GGCAGTAATG ATGAGACCCG CTATCTGCTG CAATCCTTAG CGGAGCAACA CGATTGGGTG
ACTTTGTTGC AACACCCCTA CAATCGGGGC AAAGGCGCCG CTGTGATGAC TGGGCTTCGC
AGCGCCTATC GCGATGGTTT TACCCATGCG CTGCAGGTCG ATGCCGACGG CCAACATAAT
CTGAGCGATA TCCCCGCCAT GCTGGCCAAG GCGCAGGCCA AGCCGGATGC GCTGATTTCG
GGCAAACCCG AGTACGACAA GTCCGTCCCC AAGGGGCGAC TCTATGGCCG TTATCTCACC
CATTTTTGGG TATGGGTCGA AACCTTAAGC TTTGATATTC AAGATTCTAT GTGCGGATTT
AGGGTGTATC CCTTAGCCGC CACTGAGCGC CTCTTCAGCA AGCAAGCGCT GACAGAACGG
ATGGATTTTG ATATCGAAAT TCTAGTAAAA CTCTACTGGC AGGGGGTGGA AATTCTGTTT
CATCCCACCA AGGTCATTTA TCCCGAAAAT GGCGTCAGCC ACTTTCAATG TGTGGCCGAC
AATGTGCGTA TATCTAAGCT GCACACGCGG TTATTTTTCG GCATGTTAAA GCGTCTGCCG
CAGCTGCTGC GCCGTAAACA AGCGGCTAAA TCGACGTCAT CCGCTCATAC TGCGACCCAT
TGGTCAGCCA TGAAGGAGCG CGGCAGTTAT TGGGGCATCA AACTGTTAGT CGAAAGCTAC
CGCTTTGGGG GCCATTGGCT GTGCCGCGCC ATTATGTATC CAGTGATTTG CTACTTCTTC
CTGACCGGCA AAGTCAGCCG CGAGGCCTCG AGGGATTTTC TGCGCCGAGT GCAACACCTC
GAACCGCAGC ATCCTCAGCT TAATCAGCCT GTTGGCTGGC GCGACAGTCT GAATCACTTT
ATCGCCTTCG GAAATGCGGC GCTCGATAGA ATCGATGCTT GGTGCGATCG CATCCAATTA
AGCCAAGTGG ACTTTCCAGA CCGTCAAGTG CTCGCCGATC AGCTAGAAAG TGGCAAAGGT
GCCGTGCTGC TGGTGTCCCA CTTAGGCAAT CTCGAGCTGT GCCGCGCGAT TTCAATCCAC
CAGCGTAAGG TCAAAGTGAA TGTCATGGTG TTAACCAGCC ATGCCGAAAA CTTTAATAAT
GTACTCAAGC AATTAAACCC CAATAGCTCG CTGAATTTGA TTCAAGTAAC CGAGCTAAAT
CCCGCAACCT CCATGCTATT ACAACAAAAA ATTGAAGACG GCGAGTTAGT GGTGATTGCA
GGGGATAGAA CCTCATCCCA CGCCCAAGGG CGAGTCGTGT ACGCGCCATT TATGGGTCAA
GATGCAGCCT TCCCGCAGGG GCCATTTATT TTGGCCGGAC TCTTAGATTG CCCGGTTTAT
CTGATGTTTT GCCTGCGTGA GCAAGGGCGT TATCGAGTGC ATTTAGAACG CTTCGCCGAG
ACACTTAAAG GCCCACGAGC GGGCAGAATG GAACGACTCC AACAGGCCGT TTATCGCTAC
AGCGAACGCC TCGAACACTA TGCAAGGCGT GAGCCCTTGC AATGGTTTAA CTTCTTTGAT
TTTTGGCGGG ATGATAACCA GGTTAACCGC GCGACATCCG CCCACAAAAC GACAGCAGCA
CTCCCGGAGC AGGAGCGCAC TACAGACAGG ACAGAGCATT TATGA
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| Protein sequence | MGPVPIKLAL VIPNYNHSAA ISQALSELAA LNLPCYLIDD GSNDETRYLL QSLAEQHDWV
TLLQHPYNRG KGAAVMTGLR SAYRDGFTHA LQVDADGQHN LSDIPAMLAK AQAKPDALIS
GKPEYDKSVP KGRLYGRYLT HFWVWVETLS FDIQDSMCGF RVYPLAATER LFSKQALTER
MDFDIEILVK LYWQGVEILF HPTKVIYPEN GVSHFQCVAD NVRISKLHTR LFFGMLKRLP
QLLRRKQAAK STSSAHTATH WSAMKERGSY WGIKLLVESY RFGGHWLCRA IMYPVICYFF
LTGKVSREAS RDFLRRVQHL EPQHPQLNQP VGWRDSLNHF IAFGNAALDR IDAWCDRIQL
SQVDFPDRQV LADQLESGKG AVLLVSHLGN LELCRAISIH QRKVKVNVMV LTSHAENFNN
VLKQLNPNSS LNLIQVTELN PATSMLLQQK IEDGELVVIA GDRTSSHAQG RVVYAPFMGQ
DAAFPQGPFI LAGLLDCPVY LMFCLREQGR YRVHLERFAE TLKGPRAGRM ERLQQAVYRY
SERLEHYARR EPLQWFNFFD FWRDDNQVNR ATSAHKTTAA LPEQERTTDR TEHL
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