Gene SO_4303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4303 
Symbol 
ID1171908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4481686 
End bp4482189 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content49% 
IMG OID637346029 
Producthypothetical protein 
Protein accessionNP_719828 
Protein GI24375785 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATACC CAACATTCGC ACTCGATGAT ATTACTTCCC TACACGAATC CGCCCAGGTG 
GAGTTTAAGC TTGCGCGGGG CCGTGATGGG CAAGGTCAAT TACCGGAAGA TATTTGGGCA
ACCTATAGTT CCTTCGCCAA TACCTTAGGC GGAGAGATTA TTCTTGGGGT ACGCGAAGAC
CGCGGCCATT TCACCATTGA AGGCATCCCT AATCCGCAGC CTGTATTACA GGAATTTTGG
GAGATCATCG ACAATCCTAG CCGGGTCAGC TGCAATATTT TGGCGATATC TGATGTGCAG
CTTATTGAAA TTATGAATAA AAAACTGATA AGGATTCGGG TTCCGCTCGC GCCTGAGCAT
TTAAAACCTG TATTTATTGG CACCGATGTC TACACTGGCA GCTATTTTCG GGTTGGGGAT
GCCGATATGC ATGCCAGCCG CAAGCAGGTG ATGCAAATGC TACGCCGCGC CCATCACTGC
AATAAGCTGT TCAAGGCGCG GTAG
 
Protein sequence
MTYPTFALDD ITSLHESAQV EFKLARGRDG QGQLPEDIWA TYSSFANTLG GEIILGVRED 
RGHFTIEGIP NPQPVLQEFW EIIDNPSRVS CNILAISDVQ LIEIMNKKLI RIRVPLAPEH
LKPVFIGTDV YTGSYFRVGD ADMHASRKQV MQMLRRAHHC NKLFKAR