Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4303 |
Symbol | |
ID | 1171908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4481686 |
End bp | 4482189 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637346029 |
Product | hypothetical protein |
Protein accession | NP_719828 |
Protein GI | 24375785 |
COG category | [K] Transcription |
COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACATACC CAACATTCGC ACTCGATGAT ATTACTTCCC TACACGAATC CGCCCAGGTG GAGTTTAAGC TTGCGCGGGG CCGTGATGGG CAAGGTCAAT TACCGGAAGA TATTTGGGCA ACCTATAGTT CCTTCGCCAA TACCTTAGGC GGAGAGATTA TTCTTGGGGT ACGCGAAGAC CGCGGCCATT TCACCATTGA AGGCATCCCT AATCCGCAGC CTGTATTACA GGAATTTTGG GAGATCATCG ACAATCCTAG CCGGGTCAGC TGCAATATTT TGGCGATATC TGATGTGCAG CTTATTGAAA TTATGAATAA AAAACTGATA AGGATTCGGG TTCCGCTCGC GCCTGAGCAT TTAAAACCTG TATTTATTGG CACCGATGTC TACACTGGCA GCTATTTTCG GGTTGGGGAT GCCGATATGC ATGCCAGCCG CAAGCAGGTG ATGCAAATGC TACGCCGCGC CCATCACTGC AATAAGCTGT TCAAGGCGCG GTAG
|
Protein sequence | MTYPTFALDD ITSLHESAQV EFKLARGRDG QGQLPEDIWA TYSSFANTLG GEIILGVRED RGHFTIEGIP NPQPVLQEFW EIIDNPSRVS CNILAISDVQ LIEIMNKKLI RIRVPLAPEH LKPVFIGTDV YTGSYFRVGD ADMHASRKQV MQMLRRAHHC NKLFKAR
|
| |