| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4283 |
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| Symbol | |
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| ID | 1171888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4462599 |
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| End bp | 4463657 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637346009 |
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| Product | apbE family protein |
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| Protein accession | NP_719808 |
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| Protein GI | 24375765 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGAGTGG GGAGAATTAG CATGAGATTG ACTCGTTATT TTGCAATTTC TATCTGTACA
ATGGTGATTG GTTGTCAGCC TCAGCCGACT CCTAAAATGG TTAAGATTGA AGGAGAAGCT
CAAGGAACGA CATGGCACAT CAGCTTTTGG AGTCCAAATA ACATTAATGT AAAGTTGGTT
GAAGACAATA TAAATAATCG ATTTGATGAA CTTGATAAAA ACTTATCCAA TTATCGACCT
GACTCCACTA TAAGCTTATT TAACTCGGCT CTGAGTACAG AGCCTATTGT AGTTGGTGAA
GAAATTGTGG AATTGGTCGC ACAAGCTAAA ATAGTATCCG ATAAGAGTCT TGGTTGTTAT
GATTTAACTG TAAAATCATT ATTTGATTTG TGGGGATTTG ATAAATATCA ATTAATGAAC
CCAAGTGCGA TAGCTATTGC GGAAACGCTT AAAGATACCG GTATGCAACA TATAAAAATT
AAATCTAATT CTATGGCTAA AGATAGAGCA CAAGTTCATG TAGATTTGTC TTCCATTGCT
CAGGGTTATA GTGTGGGTGA ATTAGCTGAA ATACTAGAAC GATATAATAT AAAAAACTAT
TTGGTTGAGA TAGGCGGCGA AATGGTTGTA AAAGGATATA AACCAAATGG TGAAAGCTGG
AAAGTTGCCA TTGAGCGACC TTTGCCCGAT AAAAATATAT TGCACAAACT GTTAATGATA
AAACAGGATC AGGCGATAAT GACATCGGGT ACTTATCGCC ATTATTTTGA TAATAATGGT
GTTCGTTTAT CACATATTTT AGATGCAAGA ACGGGGTATC CTGTAACGCA CAATACAGTT
TCTGTTACAG TACTGCATAA AAATCCAATG CTTGCCGATG CGTGGTCAAC TGCACTTCTC
TGTCTAGGTC ATGAAAAAGG GATTGATATT GCCAATGAAA ATTCTATCAA TGCATTATTT
ATTACTGATA AAAATAATGA GCTGATTGAG TATTCAACAA ATGGTTTTGA TCTATTTACT
ACATCCGCAG TTAAAAGTGA TGGTAATAAA AAGCATTAA
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| Protein sequence | MRVGRISMRL TRYFAISICT MVIGCQPQPT PKMVKIEGEA QGTTWHISFW SPNNINVKLV
EDNINNRFDE LDKNLSNYRP DSTISLFNSA LSTEPIVVGE EIVELVAQAK IVSDKSLGCY
DLTVKSLFDL WGFDKYQLMN PSAIAIAETL KDTGMQHIKI KSNSMAKDRA QVHVDLSSIA
QGYSVGELAE ILERYNIKNY LVEIGGEMVV KGYKPNGESW KVAIERPLPD KNILHKLLMI
KQDQAIMTSG TYRHYFDNNG VRLSHILDAR TGYPVTHNTV SVTVLHKNPM LADAWSTALL
CLGHEKGIDI ANENSINALF ITDKNNELIE YSTNGFDLFT TSAVKSDGNK KH
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