Gene SO_4281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4281 
Symbol 
ID1171886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4460581 
End bp4461225 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content37% 
IMG OID637346007 
Productpotassium uptake protein KtrA, putative 
Protein accessionNP_719806 
Protein GI24375763 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACATT TTACAGTGAT TGGACTAGGT CGTTTTGGGA TTGCAGCATC GTTAGAATTA 
ATTCATCTAG GGCATACGGT TACAGGGGTT GAACGTGATC CTAAGCTTGC AGAAAAGTAT 
GTCGATGAGT TGACACAAAC TGTAGTCTGT GACTCAACTG ATGAAAACGC TTTACGTGAG 
TTAGACCTTG ATAATAGTGA AGCAGTGTTA GTTGCGATTG GCGAAGATAT GCAATCAAGT 
TTATTGTGTA TCTTGGCATT AAAAAATCTT GGCGTAAAAC AAATATGGGT TAAAGCAAGT 
ACAAAAGCCC ATCATACAAT CGTTTCAAAA CTAGGGGTTG ACCGAATTAT TCATCCAGAA 
GAAGAAATGG GTATTCGCGT TGCTCAGGCG TTAAACTATC CTATGGTAAA TAATTACTTA 
TCTTTAGGGA GTGGTTTATA CGTTGTTGAA GTTCATATTC GCAATAAATT ACATAATTCG 
CCAATATCCG ATATTTTAAA GGGGAGTATT AAACCAATAT TAGTCAAACG AGGAACTCAA 
GTTTATTCTA GTGTAAATGC TGATTTCCGA TTATATGAAA ATGATGTGTT TTTACTCTGC 
GGCACTCGAG CTGAACTTAA GTCAATTGCG ACAAGGTTAA TGTAA
 
Protein sequence
MAHFTVIGLG RFGIAASLEL IHLGHTVTGV ERDPKLAEKY VDELTQTVVC DSTDENALRE 
LDLDNSEAVL VAIGEDMQSS LLCILALKNL GVKQIWVKAS TKAHHTIVSK LGVDRIIHPE 
EEMGIRVAQA LNYPMVNNYL SLGSGLYVVE VHIRNKLHNS PISDILKGSI KPILVKRGTQ 
VYSSVNADFR LYENDVFLLC GTRAELKSIA TRLM