Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4279 |
Symbol | |
ID | 1171884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4457392 |
End bp | 4458369 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637346005 |
Product | hypothetical protein |
Protein accession | NP_719804 |
Protein GI | 24375761 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTTTT TTACCACACT CTTTGTGGGC TACCCGATGT GGGTTTGGTT AATGTTTTTT GGATTTGTGT TGGCGTTGTT GGCCTTTGAT TTAGGCGTGC TACACAAAGA GCAGCATGAA ATTACTGTCG CAGAGAGCCT CAAGTTATCG GCCTTTTATA TTTGTATGGG GCTATTATTT GGCGCTTGGT TATGGTGGTA CAAGGGATCA ACCGCGGGGA TGGAATACCT CACGGGTTAC CTTATCGAAA AGTCGCTGTC AATGGATAAC GTTTTTGTTA TCGCCTTGAT TTTCAGCAGC TTAGGTATTC CACGTTTGTA TCAACACCGA GTGCTGTTTT GGGGCATTAT GGGCGTTATC GTGCTACGCG CCATTATGAT TGGCTTAGGC GCGGCGCTGG TGGCGCAATA CCAAGGCGTG TTGGTGTTGT TTGGTCTGTT CTTGATTTTC ACTGGTATTA AGGTGCTCTT TTCGAACGAT GAGCATGGTG ATATTCAAGA TAATAAGTTT TACAAATGGT TACGTTCTAA AATGCGCTTT ACTCCAAGCC TGCATCAAGA GAAGTTTTGG GTAAGGGGTG AGGATCATCA ACTCAGTAAA GGCTGGTGGG CAACGCCCTT GTTTTTGGCG TTGATCTTAG TAGAAACTGC GGATCTGGTG TTTGCGGTTG ACAGTATTCC AGCGATTTTT GCGATTACCC AAGATCCTTT TATCGTCTAT ACCTCTAATA TCTTTGCTAT TTTAGGTTTG CGGGCATTGT ACTTTGCTCT CGCTGCTATG GTGCATCGTT TCGAGTACCT CAAGTACGCG CTGTCGGTCG TGTTGGTGTT TATCGGTGTT AAAGTGGGGC TGGTGTACTT TAATCACGAA GGCATTGTGG ACTTTAAGAT CCCAACAGCG TTATCCCTAG GCGTCACCTT TGGTCTACTG CTTGCGGGTG TTTTATTCTC ATTGTGGAAG ACACGCGAGC AGAAGTAA
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Protein sequence | MEFFTTLFVG YPMWVWLMFF GFVLALLAFD LGVLHKEQHE ITVAESLKLS AFYICMGLLF GAWLWWYKGS TAGMEYLTGY LIEKSLSMDN VFVIALIFSS LGIPRLYQHR VLFWGIMGVI VLRAIMIGLG AALVAQYQGV LVLFGLFLIF TGIKVLFSND EHGDIQDNKF YKWLRSKMRF TPSLHQEKFW VRGEDHQLSK GWWATPLFLA LILVETADLV FAVDSIPAIF AITQDPFIVY TSNIFAILGL RALYFALAAM VHRFEYLKYA LSVVLVFIGV KVGLVYFNHE GIVDFKIPTA LSLGVTFGLL LAGVLFSLWK TREQK
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