Gene SO_4279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4279 
Symbol 
ID1171884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4457392 
End bp4458369 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content45% 
IMG OID637346005 
Producthypothetical protein 
Protein accessionNP_719804 
Protein GI24375761 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTTT TTACCACACT CTTTGTGGGC TACCCGATGT GGGTTTGGTT AATGTTTTTT 
GGATTTGTGT TGGCGTTGTT GGCCTTTGAT TTAGGCGTGC TACACAAAGA GCAGCATGAA
ATTACTGTCG CAGAGAGCCT CAAGTTATCG GCCTTTTATA TTTGTATGGG GCTATTATTT
GGCGCTTGGT TATGGTGGTA CAAGGGATCA ACCGCGGGGA TGGAATACCT CACGGGTTAC
CTTATCGAAA AGTCGCTGTC AATGGATAAC GTTTTTGTTA TCGCCTTGAT TTTCAGCAGC
TTAGGTATTC CACGTTTGTA TCAACACCGA GTGCTGTTTT GGGGCATTAT GGGCGTTATC
GTGCTACGCG CCATTATGAT TGGCTTAGGC GCGGCGCTGG TGGCGCAATA CCAAGGCGTG
TTGGTGTTGT TTGGTCTGTT CTTGATTTTC ACTGGTATTA AGGTGCTCTT TTCGAACGAT
GAGCATGGTG ATATTCAAGA TAATAAGTTT TACAAATGGT TACGTTCTAA AATGCGCTTT
ACTCCAAGCC TGCATCAAGA GAAGTTTTGG GTAAGGGGTG AGGATCATCA ACTCAGTAAA
GGCTGGTGGG CAACGCCCTT GTTTTTGGCG TTGATCTTAG TAGAAACTGC GGATCTGGTG
TTTGCGGTTG ACAGTATTCC AGCGATTTTT GCGATTACCC AAGATCCTTT TATCGTCTAT
ACCTCTAATA TCTTTGCTAT TTTAGGTTTG CGGGCATTGT ACTTTGCTCT CGCTGCTATG
GTGCATCGTT TCGAGTACCT CAAGTACGCG CTGTCGGTCG TGTTGGTGTT TATCGGTGTT
AAAGTGGGGC TGGTGTACTT TAATCACGAA GGCATTGTGG ACTTTAAGAT CCCAACAGCG
TTATCCCTAG GCGTCACCTT TGGTCTACTG CTTGCGGGTG TTTTATTCTC ATTGTGGAAG
ACACGCGAGC AGAAGTAA
 
Protein sequence
MEFFTTLFVG YPMWVWLMFF GFVLALLAFD LGVLHKEQHE ITVAESLKLS AFYICMGLLF 
GAWLWWYKGS TAGMEYLTGY LIEKSLSMDN VFVIALIFSS LGIPRLYQHR VLFWGIMGVI
VLRAIMIGLG AALVAQYQGV LVLFGLFLIF TGIKVLFSND EHGDIQDNKF YKWLRSKMRF
TPSLHQEKFW VRGEDHQLSK GWWATPLFLA LILVETADLV FAVDSIPAIF AITQDPFIVY
TSNIFAILGL RALYFALAAM VHRFEYLKYA LSVVLVFIGV KVGLVYFNHE GIVDFKIPTA
LSLGVTFGLL LAGVLFSLWK TREQK