Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4250 |
Symbol | dut |
ID | 1171854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4427303 |
End bp | 4427761 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637345976 |
Product | deoxyuridine 5'-triphosphate nucleotidohydrolase |
Protein accession | NP_719777 |
Protein GI | 24375734 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0756] dUTPase |
TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAACAC CGATTGAATT AAAGATCCTC GACTCCCGCA TTGGTTCCGA ATTTCCCCTG CCCGCCTACG CAACACCAGG TAGCGCAGGC ATGGATCTTC GCGCCATGAT AGATACCACC ATGACGATAG CCCCAGGAGA AACTCAGTTA GTCCCAACCG GAATCGCCAT CCATGTAGCC GATCCCGGCC TTGCCGCCTT GATTTTGCCC CGTTCAGGCC TTGGCCATAA GCACGGTATC GTCCTTGGAA ATCTAGTCGG CCTTGTCGAT TCTGATTACC AAGGCCCCTT GATGGTCTCT TGTTGGAACA GAAGCGATAC CCCATTTACC TTAGAAATTG GTGATCGTCT CGCACAACTG GTGTTTGTCC CTGTGGTACA AGCGCAATTC AAACTCGTTG ATGAGTTCGA CAGCTCAGAC CGTGGTGAAG GTGGATTTGG CCATTCTGGC ACTAAATAA
|
Protein sequence | MKTPIELKIL DSRIGSEFPL PAYATPGSAG MDLRAMIDTT MTIAPGETQL VPTGIAIHVA DPGLAALILP RSGLGHKHGI VLGNLVGLVD SDYQGPLMVS CWNRSDTPFT LEIGDRLAQL VFVPVVQAQF KLVDEFDSSD RGEGGFGHSG TK
|
| |