Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4190 |
Symbol | ppaC |
ID | 1171795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4358916 |
End bp | 4359836 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637345913 |
Product | putative manganese-dependent inorganic pyrophosphatase |
Protein accession | NP_719718 |
Protein GI | 24375675 |
COG category | [C] Energy production and conversion |
COG ID | [COG1227] Inorganic pyrophosphatase/exopolyphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTATGT ACGTTGTCGG TCACAAAATC CCCGATTCTG ATTCAATCTG TGGTGCTATC GCGTTAGCTT ATTTAAAAAA CCAAATCGGT GAAGAAGCCG TTGCCGCACG TTTAGGTGAG TTATCACCCG AAACCGCTTT CATTCTAGAG CGTTTTGGCT TTGAAGCACC AGAATACAAA ACCAGTTATG CAGGCGAGCA GGTTTACATT GTTGACCACT CTGAACTGAC TCAAGCGCCG GACGATATCG CCAAAGCGAC TATCGTGGGT ATTGTGGATC ACCACAAACT GGGCGATCTG ACCACTGATA CCCCATTAGA GTGCTGGATC CGCCCAGTTG GTTGCAGCAA CACAGTGATC AAAATGATGT ATGACTTTTA CCAAGTCGCC ATCCCTAAAA ACATCGCTGG TATTATGATG TGCGCCATCC TGAGCGACAC TGTGATCTTC AAATCGCCCA CCTGCACCAC TGCTGACATT CGCTGCGTAG AAGCCTTGGC CGAAATCGCT GGCATCGAAG ACTATAAAGC CCTGGGCATG GAAATGTTCA AAGTGAAATC AGCCGTTGAA GGCACGCCAG CACGCGACCT CGTGATGCGC GATTTCAAAG ACTTCAACAT GAACGGTAAC TTAGTCGGTA TCGGCCAGTT AGAAGTGATT GATCTGTCAG TCTTTGATGC AATCAAAGCC GAACTAGAAG CCGATATCAA AGCTCTGAAA GTTGAAGGCA ACCGCCACAG CGTACTGTTA CTGCTGACCG ACATCATGAA AGAAGGCTCA GAGCTGTTAG TGGTTTCGGA TGATGCCGAA CTGATTAACC GTGCCTACGG TAAAACTCCT GTCGATGGCA AAGTGTGGTT AGATGGCGTA TTAAGCCGTA AGAAACAAGT GGTACCACAA CTGCAAGCAG CTTTCGCTTA A
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Protein sequence | MPMYVVGHKI PDSDSICGAI ALAYLKNQIG EEAVAARLGE LSPETAFILE RFGFEAPEYK TSYAGEQVYI VDHSELTQAP DDIAKATIVG IVDHHKLGDL TTDTPLECWI RPVGCSNTVI KMMYDFYQVA IPKNIAGIMM CAILSDTVIF KSPTCTTADI RCVEALAEIA GIEDYKALGM EMFKVKSAVE GTPARDLVMR DFKDFNMNGN LVGIGQLEVI DLSVFDAIKA ELEADIKALK VEGNRHSVLL LLTDIMKEGS ELLVVSDDAE LINRAYGKTP VDGKVWLDGV LSRKKQVVPQ LQAAFA
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