Gene SO_4141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4141 
Symbol 
ID1171750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4297602 
End bp4298333 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content49% 
IMG OID637345869 
Productshort chain dehydrogenase/reductase family oxidoreductase 
Protein accessionNP_719670 
Protein GI24375627 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAACG CTAATAAATC CCTCGTTGTT ATCACGGGCG CCTCATCCGG CATTGGCGCA 
GCTATCGCCA AAAGTTTTAG TGCAGCAGGA CATCCGCTGT TGCTACTGGC TCGCCGCGCA
GAAGCAATGC AAGCCCTTGC TTTACCAAAC AGTTTATCCA TCAGCGTTGA TGTAACCGAT
GCAGACGCTA TCAAGGCTGC GATTAGCCAA GCAGAAGCGC AGTTTGGCCC TGTGGGTTGC
CTTATCAATA ATGCTGGCGT CATGCTACTT GGGCAAATTG ATACTCAAGA TCCTAACGAA
TGGAGCCGCA TGCTCAATAT CAATGTAATG GGCGTACTCA ATGGTATTCA CGCTGTATTA
GCTGGCATGA AGGCGCACAA AAACGGCACC ATTATCAATA TCAGCTCGGT GGCAGGTCGT
AAAACCTTTC CCAATCATGC GGCTTACTGC GCCACTAAAT TTGCCGTGCA TGCCTTAACC
GAAAACATTC GTGAAGAAGT GGCAATGGAT GACGTACGCC TGATCACTAT CGCCCCTGGC
GCAGTTGAAA CAGAGCTCCT AAGCCATACC ACGGATGAGG CCATCAAAGC GGGTTACCAT
GATTGGAAAG AACAAATGGG TGGCGTGATT GCTCCCGAAA ACGTTGCTGC AGCTACATTA
TTTGCTTGGC AACAACCACA AAATGTTTGT GTACGTGAGA TTGTATTGGC TCCCACTCGC
CAACAACCTT AA
 
Protein sequence
MTNANKSLVV ITGASSGIGA AIAKSFSAAG HPLLLLARRA EAMQALALPN SLSISVDVTD 
ADAIKAAISQ AEAQFGPVGC LINNAGVMLL GQIDTQDPNE WSRMLNINVM GVLNGIHAVL
AGMKAHKNGT IINISSVAGR KTFPNHAAYC ATKFAVHALT ENIREEVAMD DVRLITIAPG
AVETELLSHT TDEAIKAGYH DWKEQMGGVI APENVAAATL FAWQQPQNVC VREIVLAPTR
QQP