| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4122 |
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| Symbol | priA |
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| ID | 1171735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4280594 |
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| End bp | 4282807 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637345854 |
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| Product | primosomal protein N' |
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| Protein accession | NP_719651 |
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| Protein GI | 24375608 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACTGT TTGTTGAAGT TGCGTTACCT GTGCCTATGC GGCAAAACTT TACTTATCGC
GTAAAGACAA ACGAACAAAA CGATGATAGC CCCCAAGCCA AACCACAGAT TGGCGTACGG
GTAAAAGTGC CCTTTGGGCG GCAGCAACTT ATTGGTCTCG TTACCGCCAT CACCGACAGC
TGCGATCTGG CGCCAACACA ACTCAAATCC GTCATAGAGT TTATTGATGA CGCCCCCTTA
TTGCCAGAAT CGCTTTATAA ATTAACCCTC TGGGCCGCAA GATATTACTT TTGCAGCCAA
GGACAAATGC TCACGCAAGC CTTGCCGGTG GCACTGCGCA AGGGCTTAGA TGCCGCACCA
CAAAAAATCC AATACTGGCA AATCACTACA ATAGGCAGCA ATATTGCGCC AGAAACATTA
AAGCGCGCGC CCGCTCAAAA AAAATTACTC GAGCATTTAA AGCAAACCAG TCTCACACAG
GAAGAAGTCA TCAGCTTAGA GCTGAATAAG ACCGCGCTCA AAACCTTAGA AGAGAAAGGC
TGGATTGCCC AGCACGAAAA AATCGCGCAG CTCAATCTCG ATTGGCGCAG CCAACTCGAA
CTCGATGAAA CGCCTCACAG GCTAAATAAA GAGCAAGCCG TCGCCGTGAC GGTATTAACG
CAGCAGCAAG GATACCACTG TACTCTGCTC GAAGGCATTA CCGGTTCGGG TAAAACCGAA
GTCTATTTAG CCTTGCTCGA ACATATTCTT AAGCAAGGTA AGCAAGCACT TATTCTTGTA
CCTGAAATTG GCCTCACCCC GCAAACCATC AATCGCTTTA AGCGCCGTTT TCGGGTGAAT
GTTGCCGTGC TGCACTCGGG TTTAACCGAC AATCAGCGCC TCGAAGCCTG GCGCCAAGCC
CGTTGCGGCC AAGCTGCCAT TATTATTGGC ACTCGCTCCG CGTTGTTTAC GCCGATGGCA
TTTCCTGGCG TCATCATCCT CGACGAAGAA CACGACAGTA GCTTTAAACA GCAAGAAGGT
GTTGGCTATC ACGCCCGCGA CTTAGCAGTG ATGCGCGGGC ATTTAGAATC GATCCCTGTG
GTTTTAGGCT CAGCAACACC GTCATTAGAA AGCCTGCAAA ATGCACTCAG TGGCCGCTAT
CATCATCTGC AACTCGGTGA ACGGGCTGGC AATGCTAAAA AAGTACGCCA AGGCATTATC
GATATTAAAA ACCTGCCGCT CAAAGCGGGC ATGTCGGCGC CACTGATCAA TGAAATCCGC
AGCCATTTGG ATGCCGGAAA TCAAGTATTA CTATTTTTAA ACCGCCGCGG CTTTGCGCCA
GCACTGCTCT GCCACGAGTG TGGGCACTTA CATGAATGCG ACCGCTGCGA TGCATTTTTT
ACTGTGCATC AATCCTTAGG CGAGATCCGT TGCCACCACT GCGGTAATCA ATATGCCATT
CCAAGGCAGT GTCACAATTG CGGCAGTACC ATGTTGATGG GACAAGGTAT TGGTACCGAG
CAGCTCGCCG AAGCACTGCA ATTAGAGTTT CCAAAATATC CAGTGGTGCG TATCGATCGC
GATACCACTC GCCTTAAAGG TTCACTTGAA AGCCATTTAA GTGCGATTCA TAAGGGCGAG
TATAAGATCC TCGTCGGTAC CCAAATGCTG GCCAAGGGGC ACCACTTTCC AGATGTCACC
TTAGTGGGAT TACTTGATGT TGATGGCGCA CTCTTTAGCG CCGATTTTAG GGCGCCAGAG
CGCTTCGGCC AGCTTTATAC CCAAGTCGCA GGCCGCGCAG GGCGGGCCAA TAAACTCGGT
ACCGTACTAT TGCAAACTCA CCAGAGCGAT AACCCGATCC TTAGGGATTT ACTCCACCGA
GGTTATGGTG AGTTTGCCCG CAGCCAATTA AAAGAACGGC AAATGGCGCT CTTACCACCC
GCTTGGCATA TGGTACTGGT GCGCGCCGAG GCCCATTCTG CCTTAGATGC TGACAATTTT
CTTAATTCGT TTGCATCCTT GCTGCCCCAA GATAAAGAGT TTGAGATTAT CGGCCCTATG
CCCGCGCCAC TCGATCGAAA AGCAGGTAAG TTCCGCCGCC AGTTGATGTT TCAGGCCAAG
CACAGACATA GGTTGCAGCA GGAGTTTGAG CGTATTTATC CGCTTGTGGA ACAACTGCCC
GAAGCCAAAC GCTGCCGCTG GAGCTTAGAT AGGGATCCGC AGGATCTGTT GTGA
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| Protein sequence | MSLFVEVALP VPMRQNFTYR VKTNEQNDDS PQAKPQIGVR VKVPFGRQQL IGLVTAITDS
CDLAPTQLKS VIEFIDDAPL LPESLYKLTL WAARYYFCSQ GQMLTQALPV ALRKGLDAAP
QKIQYWQITT IGSNIAPETL KRAPAQKKLL EHLKQTSLTQ EEVISLELNK TALKTLEEKG
WIAQHEKIAQ LNLDWRSQLE LDETPHRLNK EQAVAVTVLT QQQGYHCTLL EGITGSGKTE
VYLALLEHIL KQGKQALILV PEIGLTPQTI NRFKRRFRVN VAVLHSGLTD NQRLEAWRQA
RCGQAAIIIG TRSALFTPMA FPGVIILDEE HDSSFKQQEG VGYHARDLAV MRGHLESIPV
VLGSATPSLE SLQNALSGRY HHLQLGERAG NAKKVRQGII DIKNLPLKAG MSAPLINEIR
SHLDAGNQVL LFLNRRGFAP ALLCHECGHL HECDRCDAFF TVHQSLGEIR CHHCGNQYAI
PRQCHNCGST MLMGQGIGTE QLAEALQLEF PKYPVVRIDR DTTRLKGSLE SHLSAIHKGE
YKILVGTQML AKGHHFPDVT LVGLLDVDGA LFSADFRAPE RFGQLYTQVA GRAGRANKLG
TVLLQTHQSD NPILRDLLHR GYGEFARSQL KERQMALLPP AWHMVLVRAE AHSALDADNF
LNSFASLLPQ DKEFEIIGPM PAPLDRKAGK FRRQLMFQAK HRHRLQQEFE RIYPLVEQLP
EAKRCRWSLD RDPQDLL
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