Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4108 |
Symbol | mshG |
ID | 1171721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4265609 |
End bp | 4266829 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637345841 |
Product | MSHA biogenesis protein MshG |
Protein accession | NP_719638 |
Protein GI | 24375595 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGTTT ATCAATACCG TGGACGCAGT GGACAAGGTC AAGCCGTAAC GGGTCAGCTC GATGCCGCCT CCGAAAGTGC GGCGGCCGAT ATGCTGTTAT CCCGCGGCAT TATTCCTTTG GAAGTTAAAG CGGCAAAGGT CGCGAAGTCA TTTTCACTGA CGCAGCTCTT TGGTAGTAAA GTCGGTTTGG ATGAATTACA AATTTTTACT CGGCAAATGT ATTCACTCAC GCGTTCGGGG ATCCCGATTT TGCGGGCCAT TGCCGGTTTA TCTGAAACCG CGCATTCCCA ACGGATGAAG GATGCGCTTA ATGATATTTC TGAGCAACTC ACCGCAGGTC GCCCGTTGTC ATCTGCTATG AACCAACATC CAGATGTGTT TGATTCACTG TTTGTTTCTA TGGTGCATGT GGGGGAGAAC ACAGGTAAGT TGGAGGATGC CTTTATTCAG CTCTCGGGCT ATATCGAGCG TGAGCAGGAA ACTCGCCGCC GGATTAAGGC CGCGATGCGT TATCCGATCT TTGTATTGAT TGCGATTGGC CTGGCGATGG TGATCTTAAA TATCATGGTG ATCCCCAAAT TTGCCGAAAT GTTTTCCCGT TTCGGTGCAG ATTTGCCTTG GGCGACCAAG GTGCTGATTG GCACATCTAA CTTATTTGTT AACTATTGGC CTTTGATGTT GGTGATGTTA CTTGGCGCCA TCATTGGGAT CCGTTATTGG CACCATACGG AAAAAGGTGA AAAACAATGG GATAAGTGGA AATTACATAT TCCCGCAGTG GGTTCGATTA TTGAGCGTTC GACCCTTGCC CGTTATTGCC GCAGTTTTTC GATGATGTTA AGCGCGGGCG TGCCGATGAC ACAGGCGCTG AGCCTTGTGG CGGATGCGGT GGATAACGCC TATATGCACG ACAAGATTGT TGGTATGCGC CGCGGCATCG AATCCGGCGA ATCTATGCTG AGGGTATCGA ATCAGAGCAA GTTATTTACA CCATTGGTGT TGCAAATGGT CGCAGTAGGA GAAGAAACCG GGCAGATTGA TCAGTTATTG AATGATGCTG CCGATTTCTA CGAAGGGGAG GTCGACTATG ACCTTAAAAA TCTTACCGCC AAATTAGAAC CGATCTTAAT TGGTATTGTG GCCGTTATTG TATTGATATT AGCCTTGGGT ATTTATCTGC CCATGTGGGA TATGCTCAAT GTGGTCAAAG GTGGTAAGTA A
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Protein sequence | MPVYQYRGRS GQGQAVTGQL DAASESAAAD MLLSRGIIPL EVKAAKVAKS FSLTQLFGSK VGLDELQIFT RQMYSLTRSG IPILRAIAGL SETAHSQRMK DALNDISEQL TAGRPLSSAM NQHPDVFDSL FVSMVHVGEN TGKLEDAFIQ LSGYIEREQE TRRRIKAAMR YPIFVLIAIG LAMVILNIMV IPKFAEMFSR FGADLPWATK VLIGTSNLFV NYWPLMLVML LGAIIGIRYW HHTEKGEKQW DKWKLHIPAV GSIIERSTLA RYCRSFSMML SAGVPMTQAL SLVADAVDNA YMHDKIVGMR RGIESGESML RVSNQSKLFT PLVLQMVAVG EETGQIDQLL NDAADFYEGE VDYDLKNLTA KLEPILIGIV AVIVLILALG IYLPMWDMLN VVKGGK
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