| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4100 |
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| Symbol | mshQ |
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| ID | 1171713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4257520 |
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| End bp | 4261293 |
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| Gene Length | 3774 bp |
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| Protein Length | 1257 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637345833 |
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| Product | MSHA biogenesis protein MshQ |
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| Protein accession | NP_719630 |
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| Protein GI | 24375587 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTTAGAG CATTTGGGAT TGGTACTCAA TTATTTTCCG TGTTGGCAAT ATTGCTAATG
ACAATGATGT CTTCACATGC AGCGATTGAT TGTGGCAGCG TATTTCCAGG GCCAATACAG
AGTTTTAGTT CTAATGGGCA GTTAGAAATG CAAAACCAAT CTATGGTTGT TAATTATGAC
AACCTAGATG TGTGTTTTAA AAAAGCCAAA CCTAACGGAG TGAATAATTC TTCGTGTGGT
ATTGGTCAGT GTAAAGTCAG TGGAATTCCA AGTTTAGCCA AGGCTATTCC CGATATACTT
GATAAAACAA ATAGTTCTAT TAACAGTAAT TCAACAGTGG CAAGTTGGAC AACACCATCG
GTGGAGCTGG GCGTCACTTT GGGATATGGT GCCAAGTTTG ATACAACTCG CTGGGATATC
GGTAATGTTG AAGTCAATGG CGGTAGCGTC ACTGTTTCTG ACGCCTATGA TGCTTATGTG
TTTAAAAGCG TGACATTCTA CCAGAATGGC ACAATGACAT TAAGGGCGGG AAAAACGTAT
ATCATAGATG GTGATCTTAA TCTTAGCTTA GGTGCGATTA ATATCATTGG TACAGGCAAT
ACTCAGTTTT ATGTGAGAGG TACTTTTACA ACATCAGATA CATCAGTATT TAATGCTTCG
AGTACTACAG ATATCTATGT TGGTAGAGAA TTGGAATTGC AAACAGATTC TAAAGTACAA
GGCAGTTTCT ACGTTGCTGG TGATGCTACG TTATTTACTC GCTCAACTTT GACTGGTCGT
TTAAGTGCAC AAAATGTGCG TATGTTTTCA AATTCCAAAG TGATTTATGA CACCAGTCCA
GCCCTTGAAT GTTTTACTGA TGATTTTTCC CGCACAAGCC TTGGAAATGA TTGGGCGATA
AAAGTGCTGG GGAGTTCAAC TCCGCCGAGT ATTGTCAGTA ATCGACTTCG AATTACCCCC
GCATCGGGGA ACCAAGCAAC CGCAAGTACC TTTCAGCGGC TATTTCCTGC AGAAAATAAC
TTAGTGACGG TCGAGTTTGA TTATTATGCG TGGTCGCCAT CTTCAGGAAC GGGTGGTGAT
GGGGTTGCGG TCATTCTCTC CGATGCGGCG GTCACGCCTC AACCCGGTAG TTTTGGTGGT
GCGCTTGGAT ATGCACAACG TAATGATGGT ACGCCTGGTT TTGCGGGTGG CTGGCTTGGG
GTGGGATTGG ATGAATATGG TAATTTTTCC AATCCGAATG AAGGGAAAGT CGGGAGACCG
GCCACCCTAC CATATTTCAG ACCACAATCA GTGACTTTAC GCGGCTCTGC TGCGGCAAGT
TACACCTATT TAGCTGGTAC AGCAGCGAAT TTAAATCCTA GAGTTGACGT TCGTAGTACG
TCAACTGCGG CGCCTAATCA TAAATATCGG ATTAAGGTTG ATTCAACTAT TCCTAGCCAA
GCTTGGGTTT CAGTTGAACG TGATGTGCGT AATGGGCAAG GGTATCAAGT ACTGGTTCCA
GCATTTAATG CTAGAGCGAT ACCTAATCAA GGTGCTGTGC CTGAAGATTT TTACTTGTCT
TTTACTGGCT CTACTGGCGG CGCCAACAAC AACCATGAAA TCGATAATTT TAAGGTGTGC
GCCCTAAAAT CTCGCCCCGT AGGTCAACAG GTGCATCATT TCGAATTTGA TTATTCGAGT
TCACCGTTGA CCTGTAAAGC GGAAACGATG GCCATTCGTG CTTGTGCAAA TGCTAATTGT
AGTCAGCTAT TTACTGATCC TGTTACTGCG CAATTATCGT TAAATCCCAA TGCTAATGGC
GCTTGGTATG TGGGTGGGGT GAATACTCCG AGTGTCAATT TTGTCAACGG CTTAGCAACT
GCCAGCCTTC GTTATAATGT CAGCACGCCT CCTGTAACCA TTGGTGTTAG TAGCTCTATC
CCATCCACCA TTGCAGGGAG TAATACTCTT TGCCGTAAAG GCTCTGGCCC GTTAAATACG
GCTTCCTGCA CTTTGAGTTT CGCAGAGAGT GGGTTTATTT TCGATGTCCC TGATAAGTTG
GCGAATAAGC CCACCTCTAT CAATATTTCT GCCGTGAGAA AGTCCAATTC AAGCCTTGAG
TGTGTCCCCG CATTTGGGAA TGCGACTAAA AATGTCGGTT TTTGGAGCAC TTATGTTTCC
CCGTCATCCA TTCCGAGCGC TTTGCAGCAA GCGATAACGA TTAAGGGGAA TGTTACGGGG
GCAATAACGG CAATTGGCAA AACCCAAGCC TTGCGTACTC AAATTCCTTT GCGGTTTACT
AATGGCGTGG CCTCCCTTGA GATTAATTAC CCCGATGCTG GGCGAGTTCA ACTCGACGCG
AGGCTTGATG GAACTGGGGA AGATACAGGT CTAGTGATGA CAGGCTCTGA TCAGTTTGTC
AGTGTACCTG CGGGATTATG CGTTAAGGCC GCAGATGCCA GTGCTTACTG CCCAAGTGCT
GATATGAGCT GTAATGCTTA CCGTAAGGCG GGGCAAAATT TTGGTATGAC ATTACAAGCC
ATGGCATGGG AAAAAGATGG CGATACGGAC TTTTGTTCGG GCAACTTATC CACACCTAAC
TTTATCGATG CGCAGATGAA ACTTGCGAGT GATGTGGTTG CACCCAGCAT CGCCAATGGT
GGCCATGATG GTGTACTAGG TATGACATCC TACAGTCACA CGGCGCAGAC CAATAACCTT
AATACCATCA GTAATCAGAG CATTAGTGAC GTCGGCGTAT TCCAAATTGC GGCGCAGGCG
ACGCCCAATT ATTTAGGGAC GGCAAGCAGC CTGAATATTC CGATTGGCTA TTCAGCCAAT
ATTGGCCGTT TTGTGCCCGA TAGGTTTTTA GTCGGTGATA TCTCCGTCTT GCCCGCCTGC
GGTGGCTTTA GTTATATGGC TCAACCCTTC CCGATGTCGA TGAGCATCAA AGCCTTGAAT
ATTGGTGGTG CAGTAACGCA AAACTATTTC CCGCCGTTTT CCCATGCGAG TGCCAAATTA
GTGGGAGAAA ACAATAATAA CGGCGTTGAT TTGCAGAGCC GTTTAAGCGC CTTGCCAGTA
AATGCGGCAA GTTGGAACCA AGGCGTGGCG ACAGTTGATG GCAGTTACCG AGCGAACGTG
AGTCGTATGA CACCAAATAT CGCTGCAAAT CAGTATCAGG ACGGCCCCTT CGAACTGCTC
GATATTGGCG TGCAATTGAT GGACAACGAC CCAAGACCAA ATGGCTTATA CAGCTATGTA
GCCTTAGCGG ATATGGATGC GGCATCTACG GGCACTTGCA CTAACTGTAA TGCGAGAAAA
ATCACTACTC AGATCCTACG TCACGGCCGC GTGGTGATGG ATAACACCTA TGGCCCTGAA
ACTGAAATCC TCAAAATGCC AACCAGAGCT GAGTATTGGA ATGGAACTAA CTGGGTGTTA
AATGGGGATG ATAGCTGTAC TATCGCCACC TATGGCTTAG GTTCGCAGGT GGATAATGCT
GGCCTTGGCT ACAACTTTGA TCCCGATTTA GCCGCAGGGC AGAGTATCAA TCGAACAGGT
GCATCTTTAG CTTTTCAAGC GGGGCAATTT GATTTGCTGT GGCGGGCAGT GACCTCAAGC
GGCAATTTAT ATCGCGGCCA AGTGACTGCG CCTTTGGATG TACCCACATG GTTAGAATGG
TATTGGAACT GGAATGGTGT CACGCCCAGT AGCTTATCAG ATCCTCGCGC CAGTGGATTT
TTTGGGCGTT ACCGAGGTCA TGACAGAATC ATCTATTGGC GAGAAGTCAA TTAA
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| Protein sequence | MVRAFGIGTQ LFSVLAILLM TMMSSHAAID CGSVFPGPIQ SFSSNGQLEM QNQSMVVNYD
NLDVCFKKAK PNGVNNSSCG IGQCKVSGIP SLAKAIPDIL DKTNSSINSN STVASWTTPS
VELGVTLGYG AKFDTTRWDI GNVEVNGGSV TVSDAYDAYV FKSVTFYQNG TMTLRAGKTY
IIDGDLNLSL GAINIIGTGN TQFYVRGTFT TSDTSVFNAS STTDIYVGRE LELQTDSKVQ
GSFYVAGDAT LFTRSTLTGR LSAQNVRMFS NSKVIYDTSP ALECFTDDFS RTSLGNDWAI
KVLGSSTPPS IVSNRLRITP ASGNQATAST FQRLFPAENN LVTVEFDYYA WSPSSGTGGD
GVAVILSDAA VTPQPGSFGG ALGYAQRNDG TPGFAGGWLG VGLDEYGNFS NPNEGKVGRP
ATLPYFRPQS VTLRGSAAAS YTYLAGTAAN LNPRVDVRST STAAPNHKYR IKVDSTIPSQ
AWVSVERDVR NGQGYQVLVP AFNARAIPNQ GAVPEDFYLS FTGSTGGANN NHEIDNFKVC
ALKSRPVGQQ VHHFEFDYSS SPLTCKAETM AIRACANANC SQLFTDPVTA QLSLNPNANG
AWYVGGVNTP SVNFVNGLAT ASLRYNVSTP PVTIGVSSSI PSTIAGSNTL CRKGSGPLNT
ASCTLSFAES GFIFDVPDKL ANKPTSINIS AVRKSNSSLE CVPAFGNATK NVGFWSTYVS
PSSIPSALQQ AITIKGNVTG AITAIGKTQA LRTQIPLRFT NGVASLEINY PDAGRVQLDA
RLDGTGEDTG LVMTGSDQFV SVPAGLCVKA ADASAYCPSA DMSCNAYRKA GQNFGMTLQA
MAWEKDGDTD FCSGNLSTPN FIDAQMKLAS DVVAPSIANG GHDGVLGMTS YSHTAQTNNL
NTISNQSISD VGVFQIAAQA TPNYLGTASS LNIPIGYSAN IGRFVPDRFL VGDISVLPAC
GGFSYMAQPF PMSMSIKALN IGGAVTQNYF PPFSHASAKL VGENNNNGVD LQSRLSALPV
NAASWNQGVA TVDGSYRANV SRMTPNIAAN QYQDGPFELL DIGVQLMDND PRPNGLYSYV
ALADMDAAST GTCTNCNARK ITTQILRHGR VVMDNTYGPE TEILKMPTRA EYWNGTNWVL
NGDDSCTIAT YGLGSQVDNA GLGYNFDPDL AAGQSINRTG ASLAFQAGQF DLLWRAVTSS
GNLYRGQVTA PLDVPTWLEW YWNWNGVTPS SLSDPRASGF FGRYRGHDRI IYWREVN
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