Gene SO_4096 details

Gene Information

• Locus tag: SO_4096
• Symbol: mreD
• ID: 1171710
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 4254528
• End bp: 4255016
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637345830
• Product: rod shape-determining protein MreD
• Protein accession: NP_719626
• Protein GI: 24375583
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2891] Cell shape-determining protein
• TIGRFAM ID: [TIGR03426] rod shape-determining protein MreD

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTAC AAGCGGCTAA TGGACGTATC GTGGTTTGGC TGACCTTGTT TGTCGGACTC 
TTAAGCCAAA TTATGCCTCT ACCTACGATT GTTGAGGCTT GGCGGCCGGA TTGGCTACTG 
ATGATTTTGA TCTACTGGTC CATTGCGTTG CCACACAGGT ATAACATTCT CACAGCATGG 
GTAATGGGTT TAGCTCTCGA TATTCTCTTG GGCGCCACCT TAGGGGTACG TTCTCTGGCG 
ATGTCGCTAG TGATTTATAT TGCGATTTTA CATTGTCAGC GTTTACGCAA CTTCCCTAAA 
TGGCAACAGT CGCTGGTAGT AATGCTGCTC ATTGCTATCT ACCACCTGAT TGTTTATTGG 
GTCGAGTTTG TGATGGATGG CGCAACATTC CACGCGGAAC TGTTTTTGCC TGCGCTATCG 
GGCCTGGTAT TTTGGCCTTG GATTTTTTGG ATTTTACGTC GTATCCGACG TCATTATAAG 
GTTCGTTAG 

 

Protein sequence

MSLQAANGRI VVWLTLFVGL LSQIMPLPTI VEAWRPDWLL MILIYWSIAL PHRYNILTAW 
VMGLALDILL GATLGVRSLA MSLVIYIAIL HCQRLRNFPK WQQSLVVMLL IAIYHLIVYW 
VEFVMDGATF HAELFLPALS GLVFWPWIFW ILRRIRRHYK VR