Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4080 |
Symbol | |
ID | 1171698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4233959 |
End bp | 4236439 |
Gene Length | 2481 bp |
Protein Length | 826 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637345818 |
Product | hypothetical protein |
Protein accession | NP_719610 |
Protein GI | 24375567 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGATTTA GCAAAACGTT ATCAGTATTT TCTTGGGCAT TACTGGGCGC AACTGCGCTC AGTGGTTGTA ATGGCGCCGC TGATGGCACT GACGCTGATG GCAGTACCGA CAGTTATAGC CTCAGCTTAA GCTACAAAAC CTTAGTTAAC GGTCAATGTG CCGATAGCAC GAGCAGTTTA AGTTTCCCTA CTGACGCCAG CTTTTGTGCG CTTGCAACCT TAAAACAAGG CTCAGCAAAC GTCAGCGGAC AACTGATTAA TTTTAGCGCC ACCTTAGGCA CAGTCTCCCC AGCAACGAAA TTAACCAATG CCAATGGTGT GGCTGAAGTG ATTATTGCTA ATGCAAGCTT AACCGAAGGT GCGGGGACCG TCAGCGCAAC CTACACTCCC ACAGGTGCTG CAGCCTTAAC GGCTACACGT AACTATGAAT TTATTGGCAA GGGCGGGTCG GGTACCGTTA CTCCACCCAA ACTGAGTGCT AGTATTGTCA ATGGTGCAAA CTTGGTCACA CGCTTTAAAG TGGATGAAGC CGTACAACTG CAAGCCATCT TGCTTGATAC TGAAAGCAAA GGCATTGCCG ATGCTAAAGT CACCTTTAGT GCGGGCACCG CCACCCTCAA TCCAGCTAGC GCATTGACCA ATAGCCAAGG TCTTGCCCAG GTGACTTATA CGCCAAGCGC GACTGAGTTA GGGGCAAATA CCTTAACAGT GACAGTCGAT TATCAAGGTC AATCGCTGCA AAGTAGCAGC TTATATGAAG TGCTCAGCAA AGATGCCATC AACGAAACGG GCACCCTCAA GCTAGGATCG TTTAACGGAA CCAGCTTCAC TGAAGGTAAA CTTGGCAGCA CTTTAACGCC ACAGACTGAT GGCAGCTATA AAATTAGCGC CGGCGGCAGC TTTGGGGTAA CCGCAAGCTT AGTATTAGAA GCGAGTGATG GCACGATTAC TCGAGTACAA ACGCCTTCAT CAATGAGTTT TAGCTCTGAC TGTACTGCCA GCAATAACGC CACCTTAGAC ACGCCTGTCA CTACCTTATC GGGCAATGCC AGCTCAACCT TCCAAGACAC CAGTTGCAGC GGTAACAGTG AGCGTAATGA CCAAATTATC GCGACCACAG TGGTCGGCAA TCAAACGCTT ACGGCCAATT TCCCGTTCAC GCTACAGCGC CAAACCCTCG CAAGCCTAAG CTTTGAATCG GCAACGCCTA GCCAAATTCG CATCAAAGGT GCGGGTGGTA CAGGGTCGAG TGAATCATCC CTAGTCAGCT TTAAAGTCAC CAGCGCAAAT GGCCAGCCCG CAGCGCAGCA AAAGGTCAGT TTTAGTTTAG ATACCGTTGT TGGCGGCTTA AGTTTTGCCA ATGGCAGCGC CAGTGCAGAG AGCCTCACTA ACTCCCAAGG TATCGCCAGT GTGCGAGTGC TATCGGGCAC TGTGCCCACC CCCGTTCGCG TTGTTGCCAC TGCCGTGGAT GCTGATACCA AAGAGGTGAT TACCAGCCAG TCAGAGCAAT TAACCGTCAA TACAGGTTTG CCACAACAGC TTGGTTTTAG CCTGTCGACG ACGATAGTCA ACCCAGAAGC GGGCGATCAT GATGGTGAAA CAGCGACGAT AACCGCAAGA CTATCGGACA GTTTTGGAAA CCCAGCGCCC GACGATACCA CGATTAACTT CACCACAGAG GGCGGGCAAA TCGCCCCAAG CTGCCAGACC AAAAATGGTG CTTGCAGCGT GACTTGGACA TCCAGCGATT ATCGCCCTCA GGATCATCGC ATTAGCATAT TGGCTTACGC CCTCGGTCAC GAAACCTTTT TCGATACCAA TGGCAACAAC CAGTTTGATA GCGCAGATGG CGGGGCTATC GCTAAAGCCT GTTTATTCAA TGGTGTAGCA ACTAACTGCA GCGGTAATGG TATGGATGTC GAAACCTTCC ACAGCAAGGG GTTTAGCGAC TTACCGACGG CGTTTCGTGA TGATAATGAA AACTTTAGCT TCGACAGTGG CGAGCGCTAT TTCGACAACC TCGCCCGTGA CACTTATCCT GCAGCCGATG GCAAGTTTAA CGGCCCGCAA TGCCTAGGCA GCCTCTGTGG TACAGGTCAA GCTAACAAAA CCTATGTTCG CAAAGGATTG GTAATGAGCA TGTCTGGCTC ACAGGCTTAT ATCAGTGTGA TGCAGGACGG TGTGCGACTT GCCAGCGTCA ATGATATAAA ACCCGTTGCC GCAGGTGCCC AATCTAAGTT TGTGGTGTTT GTTCACGACA GTGCCAAACA AATTCTGCCC GCCAAAACCA GTATCGAACT CTGTGTCGAC TGTAATGGTG CTCCAGAGAT TACCGAGGTT CCTAATACCC TCTCTGCTAA GGATGGTTTA GGCACTCCAC TCAGTTTTAG CGCCTTCGCA GGCAATAATG TCAGCATTAT TGCCACGACC CCTAAGGGTA TCAAAACCAC CAATTTAGGC TTTACGGTGC CAACGTTGTA A
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Protein sequence | MRFSKTLSVF SWALLGATAL SGCNGAADGT DADGSTDSYS LSLSYKTLVN GQCADSTSSL SFPTDASFCA LATLKQGSAN VSGQLINFSA TLGTVSPATK LTNANGVAEV IIANASLTEG AGTVSATYTP TGAAALTATR NYEFIGKGGS GTVTPPKLSA SIVNGANLVT RFKVDEAVQL QAILLDTESK GIADAKVTFS AGTATLNPAS ALTNSQGLAQ VTYTPSATEL GANTLTVTVD YQGQSLQSSS LYEVLSKDAI NETGTLKLGS FNGTSFTEGK LGSTLTPQTD GSYKISAGGS FGVTASLVLE ASDGTITRVQ TPSSMSFSSD CTASNNATLD TPVTTLSGNA SSTFQDTSCS GNSERNDQII ATTVVGNQTL TANFPFTLQR QTLASLSFES ATPSQIRIKG AGGTGSSESS LVSFKVTSAN GQPAAQQKVS FSLDTVVGGL SFANGSASAE SLTNSQGIAS VRVLSGTVPT PVRVVATAVD ADTKEVITSQ SEQLTVNTGL PQQLGFSLST TIVNPEAGDH DGETATITAR LSDSFGNPAP DDTTINFTTE GGQIAPSCQT KNGACSVTWT SSDYRPQDHR ISILAYALGH ETFFDTNGNN QFDSADGGAI AKACLFNGVA TNCSGNGMDV ETFHSKGFSD LPTAFRDDNE NFSFDSGERY FDNLARDTYP AADGKFNGPQ CLGSLCGTGQ ANKTYVRKGL VMSMSGSQAY ISVMQDGVRL ASVNDIKPVA AGAQSKFVVF VHDSAKQILP AKTSIELCVD CNGAPEITEV PNTLSAKDGL GTPLSFSAFA GNNVSIIATT PKGIKTTNLG FTVPTL
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