Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4018 |
Symbol | |
ID | 1171646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4165038 |
End bp | 4166408 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637345766 |
Product | hypothetical protein |
Protein accession | NP_719548 |
Protein GI | 24375505 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAACA ATAAACTCAA AGGATTCGCG GTGATGACTT TCGCCTGTTT AGGCGTTACC GCTTGTGGTG GTTCTGATAA TAAAGATGAG GATACCTCTA AAACCGATAC TTATGTGCAA TTCTACAATG CCACCGCAGG CAGCACTACT ACTGCGCTGA AGATTGGCGA TAAAACCTAT GAAAGTGTGA GCTTCGCCGA TGCGATGCCA CGCTTTACGT CAACTCCCGG TGTGAGTGCG GTAGAAGTGA TGGGTAAGGA TGCGGCAAAT AAAGATATTT CGCTCTACAA AGAGAATATC GATTTAAAAA CGGCAACCGA CCATTTCTTT GTCTTGCATG GGGATTTTTC CTCGCCAGCC CTTTTGAATA TCAATTACTC GCGCACCGAG CTCGATAAAC AAAACGCCGA AGCAGACAAG AGCAAAATGC AGTTGTTGAT TGCACATACA GCGACCAAGG CGCCAGCGTA CGATGCGTAT ATTGCCAAAG CGGATAAAGG CTTTGCCGAT GCGGTGATGC TTGGCAGCGT CTCCTATGGC GAGGTTTCAG CGCCGCAAAT TATGGATACC GGCGACTATA AAATTTATTT GACCGCGGCG GGTACGACCA ATATCAGCTA CACCACGGCG AGCATTAACT TTAAAACCAA GGTGCCCTAT AAATTAATTT TGAGGGAAAG CTTTGGCGCA TCAGCGGCCA AAATCAGTTT AGACAGCGTC GACTCAACCA CCAATGTGCG TAACCATGTC GCCCTCGAGA GCAGTGTTGA TTTCAGGGTA TTCAATGGCT TGGCTACACA TAATGTTGAT GTGAAAGTGG TGAGTAGTAA ACAAGAAGCG CTATTTAGTA ATGTGGCTCC CTTTGGTGTA ACGGCCTATA AAGGTGCCGA GTTTAATGAC TTTGGCGTGA GCGTATTTGA CCATACTAGC CAAGCTAAAT TACTCGACAA TGTGCTGATC ACCCTTAATC AAGATGATAT TAAAACCATC TTTATTTATG AGCAGACCAC AGCTCAGGGC AGTCAAGTGA AGGCGATGGA GATGAAACAA ACTCAAACGC CAAGTCCCTA CAGCTTCAAG TTCGATATCG TGAGTTTTGC CGATAAGAGT AATCTTACCT TGTACTTTTT AAAGGCGAAC GACACAATTG ATACGGCAGC CTATAAAATC AGTGCGGTTA ATCCAACGGT GCCGCAATCG TTAGTGGTGC CCAAAGGTGA GTATTCTATC AAGGTTATCT CTGTAGAAAA TGGCTCAAAA ACAGTGGTTT ACGCCTCTGA TATGATTGAT TTTAATAATC AAGATAACGT CACTATGGTG CTGAACAAGG ACGATTCAAC CAGTTTTGGC TACAACTTGG TTAAGATCTA A
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Protein sequence | MLNNKLKGFA VMTFACLGVT ACGGSDNKDE DTSKTDTYVQ FYNATAGSTT TALKIGDKTY ESVSFADAMP RFTSTPGVSA VEVMGKDAAN KDISLYKENI DLKTATDHFF VLHGDFSSPA LLNINYSRTE LDKQNAEADK SKMQLLIAHT ATKAPAYDAY IAKADKGFAD AVMLGSVSYG EVSAPQIMDT GDYKIYLTAA GTTNISYTTA SINFKTKVPY KLILRESFGA SAAKISLDSV DSTTNVRNHV ALESSVDFRV FNGLATHNVD VKVVSSKQEA LFSNVAPFGV TAYKGAEFND FGVSVFDHTS QAKLLDNVLI TLNQDDIKTI FIYEQTTAQG SQVKAMEMKQ TQTPSPYSFK FDIVSFADKS NLTLYFLKAN DTIDTAAYKI SAVNPTVPQS LVVPKGEYSI KVISVENGSK TVVYASDMID FNNQDNVTMV LNKDDSTSFG YNLVKI
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