Gene SO_3997 details

Gene Information

• Locus tag: SO_3997
• ID: 1171626
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 4135154
• End bp: 4135642
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637345746
• Product: hypothetical protein
• Protein accession: NP_719527
• Protein GI: 24375484
• COG category: [S] Function unknown
• COG ID: [COG2862] Predicted membrane protein
• TIGRFAM ID: [TIGR00645] conserved hypothetical transmembrane protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAA TATTTGAAAG ACTAATGTAT GCATCACGCT GGATTATGGC ACCCATCTAC 
TTGGGGCTGA GTCTGGTGTT ATTGGGCTTA GGCATTAAAT TCTTCCAAGA AATCTTCCAT 
ATTCTGCCGA TCATTTTTGA GATGACTGAA GTGGATTTAG TGCTGGTGAC CCTGTCTTTG 
ATTGATATCA CCCTCGTGGG CGGCCTGATT GTGATGGTGA TGTTTTCTGG CTACGAGAAT 
TTTGTCTCGC AGCTGGATGT GGGCGAAGAC AGTGAGAAGC TAAGTTGGCT GGGTAAATTA 
GATTCTGGCT CACTGAAAAA CAAAGTGGCG GCGTCGATTG TGGCGATTTC GTCTATTCAC 
CTACTGAAAA TCTTTATGGA TGTGAAGAAT ATCGATAACG ACAAAATCAT GTGGTATCTG 
TTAATCCACA TCACCTTTGT GTTATCAGCC TTTGCCATGG GCTATTTGGA TAAAATGACC 
CGCAAATAA 

 

Protein sequence

MEKIFERLMY ASRWIMAPIY LGLSLVLLGL GIKFFQEIFH ILPIIFEMTE VDLVLVTLSL 
IDITLVGGLI VMVMFSGYEN FVSQLDVGED SEKLSWLGKL DSGSLKNKVA ASIVAISSIH 
LLKIFMDVKN IDNDKIMWYL LIHITFVLSA FAMGYLDKMT RK