Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3982 |
Symbol | |
ID | 1171614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4119636 |
End bp | 4120265 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637345734 |
Product | DNA-binding nitrate/nitrite response regulator |
Protein accession | NP_719512 |
Protein GI | 24375469 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTAAAC CTTATTCAGT TCTTGTGGTG GACGACCACC CACTCCTTCG TAAAGGCATT TGCCAACTAA TCACCTCCGA CCCCGACTTT AGTCTCTTCG GTGAAGTAGG CAGCGGTTTA GATGCCTTAA GCAGCGTTGC AACAGATGAA CCAGACATCG TCTTACTCGA TTTGAATATG AAGGGAATGA CGGGCCTAGA TACCCTCAAT GCCATGCGCC AAGAAGGCGT GACTTCACGA ATTGTCATCC TTACAGTTTC GGATGCAAAA CAAGATGTTA TTCGCCTTTT ACGTGCTGGG GCGGACGGTT ATTTACTTAA AGATACTGAA CCAGACCTCC TCCTTGATAA ACTTAAAAAT ACCATGTCAG GCCACAGGGT GATCAGTGAA GAAGTTGCAG AATACCTCTA TGAACTTAAA AATGCCGCCG ATGAGCAAGA ATGGGTTTCA AGCTTGACAC CAAGGGAGTT GCAAATCCTG CAACAACTGG CGGAAGGCTT AAGCAATAGA ATGATTTCAG AACACTTACA CATCAGTGAA GGTACAGTGA AAGTGCATGT GAAAAATCTG CTGCGTAAGG CCAATGCCAA ATCGAGAACC GAGATGGCGG TAAGGTATCT AAACAATTAA
|
Protein sequence | MGKPYSVLVV DDHPLLRKGI CQLITSDPDF SLFGEVGSGL DALSSVATDE PDIVLLDLNM KGMTGLDTLN AMRQEGVTSR IVILTVSDAK QDVIRLLRAG ADGYLLKDTE PDLLLDKLKN TMSGHRVISE EVAEYLYELK NAADEQEWVS SLTPRELQIL QQLAEGLSNR MISEHLHISE GTVKVHVKNL LRKANAKSRT EMAVRYLNN
|
| |