Gene SO_3952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3952 
Symbol 
ID1171589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4095935 
End bp4096408 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content43% 
IMG OID637345709 
Productmce-related protein 
Protein accessionNP_719482 
Protein GI24375439 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGACAC GAAAAATTGA ATTATTAGTG GGTGTGTTTC TTTTAACGGG TTTAGCGGCT 
TTTTTAGTAT TGGTGTTTAA AGTCGCCAAT ATTGAAGTGC AAACCAGCGA CAGCAGCTAT 
ACCCTCAGCG CCAACTTTAC CAATATTGGT GGCCTTAAAG TACGCTCTCC CGTCAAAGTG 
GGCGGTGTGG TGGTAGGCCG AGTGAGCAAG ATTGACTTAG ACCCAGTAAA ACTGGTGGCT 
GTAGTCACGA TTGTGATGGA TAAACGTTAC GATAAATTCC CTGAAACCAG TAGCTTAGCT 
ATTTTAACTT CAGGTTTGCT CGGTGAGCAG TTCCTCGGAC TAACACCGGG CTTTGTCGAT 
GATGATGTGA GTATGCTCAA GGATGGCGAC AAGATTGACG ATACTCGCTC AGCATTAGTG 
TTAGAAGATC TGATTGGTCA GTTCTTATAT AGTATGGGTT CAAAGGATAA ATAG
 
Protein sequence
MLTRKIELLV GVFLLTGLAA FLVLVFKVAN IEVQTSDSSY TLSANFTNIG GLKVRSPVKV 
GGVVVGRVSK IDLDPVKLVA VVTIVMDKRY DKFPETSSLA ILTSGLLGEQ FLGLTPGFVD 
DDVSMLKDGD KIDDTRSALV LEDLIGQFLY SMGSKDK