Gene SO_3941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3941 
Symbol 
ID1171579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4085549 
End bp4086661 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content45% 
IMG OID637345700 
Producthypothetical protein 
Protein accessionNP_719472 
Protein GI24375429 
COG category[R] General function prediction only 
COG ID[COG1485] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCCAGT TAAGCCCTTG GCAGCATTAC CAAAAAGATC TTACTCGAGA TGGTTTTTCC 
CATGATCCGG CGCAGGAAAT TGCTGTTAAG GCGCTGCAAC GGGTTTATGA GGATTTAACC
GCAGCCGAAG AGCCTAACTC TTTGTTTGGT AAATTATTTA CCTCTTTTGG GTTAACATCT
GCGCCCGCGC CTACAAAAGG ACTTTATCTT TGGGGGGGCG TTGGCCGCGG CAAAACCTAT
CTGATGGACA CCTTTTTTGA TACCTTGCCA GGCAATCAAA AATTAAGGGC GCATTTTCAT
CGTTTTATGC ATCAACTGCA TTTAGACTTA GATGCGCTTA AAGGTACGCG AGATCCATTA
TTAGTCATTG CAAAACAAAT GGCGGCTAAA TATAGAGTCA TTTGTTTTGA TGAGTTTTTT
GTGTCAGATA TCACCGACGC CATGTTACTT GGCACCTTAT TTCAAGCCCT CTTTAAAGAA
GGCGTGGTCT TAGTGGCGAC TTCAAATATC ATCCCTGATG ACTTATATAA AAATGGGTTG
CAACGGGCCC GTTTCTTACC GGCTATTGCA CTGATTAATC AACATTGTGA AGTACTTAAT
GTGGACTCGG GGATCGACTA TCGTTTACGG ACGTTAGAGC AGGCAGAGAT TTATCATCAT
CCATTGGACG AGCAAGCCGA TACTAACTTG CTGCGTTATT TCGGCCAGTT AGCACCAGAG
GCTGAAATCT CAACCGAAGC GATCGAAATT GAAGGACGCG CAATTTCAAT ACGTCAACAG
GCGCAAGGCG TCTTACTGGC GGATTTCAGA GCCCTCTGCG ATGGCCCGCG AAGCCAGCGG
GATTATATGG AGTTAGCGCG GATTTATCAT ACCGTGTTGG TCAGTGGTAT TGAGCAAATG
GGTGCGTTTT TAACCGGTGA TGATATCGCC AGACGTTTTT TGGCGATGGT GGATGAGTTT
TACGAACGAA ACGTTAAATT GATCGTGTCC GCGCAGGTGC CGTTAGAAGA CATTTATGCC
GACGGCTTAT TGAGTTTTGA ATTCAGACGT TGTCGTTCTC GCTTGATTGA AATGCAATCC
CATGATTACT TAAAATCAGA GCATTTACCC TAA
 
Protein sequence
MPQLSPWQHY QKDLTRDGFS HDPAQEIAVK ALQRVYEDLT AAEEPNSLFG KLFTSFGLTS 
APAPTKGLYL WGGVGRGKTY LMDTFFDTLP GNQKLRAHFH RFMHQLHLDL DALKGTRDPL
LVIAKQMAAK YRVICFDEFF VSDITDAMLL GTLFQALFKE GVVLVATSNI IPDDLYKNGL
QRARFLPAIA LINQHCEVLN VDSGIDYRLR TLEQAEIYHH PLDEQADTNL LRYFGQLAPE
AEISTEAIEI EGRAISIRQQ AQGVLLADFR ALCDGPRSQR DYMELARIYH TVLVSGIEQM
GAFLTGDDIA RRFLAMVDEF YERNVKLIVS AQVPLEDIYA DGLLSFEFRR CRSRLIEMQS
HDYLKSEHLP