Gene SO_3907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3907 
Symbol 
ID1171547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4054666 
End bp4055148 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content43% 
IMG OID637345668 
Producthypothetical protein 
Protein accessionNP_719438 
Protein GI24375395 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTTA AGACATTGAA ACCGATATTC AAACAGATGT TTAATTGTGT TGCCTTATCT 
TGTGCATCAT TTTCTGTTTT CGCCAGTGTA GTGATGACCG AAGGTCATGT ACGTGCAATG
CCTGATACAG TACCTAATAC CGCAGCTTAT TTTACGCTCG AAAATCATAG CGACAAGGCC
GTTCGATTGA TCGGAGTGAC TACTGATGTG GCGAACGAAG CGCAATTACA TACCATGATT
CAAGAGCAAG GTATGGTAAA AATGCGCCAT GTTGAAGGCT TTGATATCCC ATCCCATGGA
ACATTAACCC TCATGCCGTC AGGGGAGCAT GTCATGCTAA TTGGGCTGAA AGCGCCATTA
GCGTTAGATC AGCAAGTTAA GCTGCAATTA CAGTTTAACG ATGGCGAAAA TATGACGATT
ACATTGCCTG TCGCTAAGCA GGCTGAAAAT GCTGCCGAAC ACGAGCATCA TCACCATCAT
TAA
 
Protein sequence
MEFKTLKPIF KQMFNCVALS CASFSVFASV VMTEGHVRAM PDTVPNTAAY FTLENHSDKA 
VRLIGVTTDV ANEAQLHTMI QEQGMVKMRH VEGFDIPSHG TLTLMPSGEH VMLIGLKAPL
ALDQQVKLQL QFNDGENMTI TLPVAKQAEN AAEHEHHHHH