Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3907 |
Symbol | |
ID | 1171547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4054666 |
End bp | 4055148 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637345668 |
Product | hypothetical protein |
Protein accession | NP_719438 |
Protein GI | 24375395 |
COG category | [S] Function unknown |
COG ID | [COG2847] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGTTTA AGACATTGAA ACCGATATTC AAACAGATGT TTAATTGTGT TGCCTTATCT TGTGCATCAT TTTCTGTTTT CGCCAGTGTA GTGATGACCG AAGGTCATGT ACGTGCAATG CCTGATACAG TACCTAATAC CGCAGCTTAT TTTACGCTCG AAAATCATAG CGACAAGGCC GTTCGATTGA TCGGAGTGAC TACTGATGTG GCGAACGAAG CGCAATTACA TACCATGATT CAAGAGCAAG GTATGGTAAA AATGCGCCAT GTTGAAGGCT TTGATATCCC ATCCCATGGA ACATTAACCC TCATGCCGTC AGGGGAGCAT GTCATGCTAA TTGGGCTGAA AGCGCCATTA GCGTTAGATC AGCAAGTTAA GCTGCAATTA CAGTTTAACG ATGGCGAAAA TATGACGATT ACATTGCCTG TCGCTAAGCA GGCTGAAAAT GCTGCCGAAC ACGAGCATCA TCACCATCAT TAA
|
Protein sequence | MEFKTLKPIF KQMFNCVALS CASFSVFASV VMTEGHVRAM PDTVPNTAAY FTLENHSDKA VRLIGVTTDV ANEAQLHTMI QEQGMVKMRH VEGFDIPSHG TLTLMPSGEH VMLIGLKAPL ALDQQVKLQL QFNDGENMTI TLPVAKQAEN AAEHEHHHHH
|
| |