Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3801 |
Symbol | |
ID | 1171445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3956063 |
End bp | 3956833 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637345570 |
Product | ABC transporter, permease protein |
Protein accession | NP_719337 |
Protein GI | 24375294 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAGC TGTATTTTAT TGCCTTCAAA AGCATATTAA CCAAGGAAAT TAATCGTTTT ACACGGATTT GGGTCCAAAC CTTGGTGCCG CCAGCAATCA CTATGACCTT GTATTTCCTT ATTTTTGGTA ACTTGGTTGG CAGTCGTATT GGGGAAATGG GCGGTGTGTC CTATATGGAG TTTATTGCAC CGGGTCTTAT TATGATGTCG GTGATTACTA ACTCCTATTC GAATGTGGCG AGCTCTTTTT ATAGTGCCAA ATTCCAGCGC AATCTTGAGG AGTTAATGGT CGCGCCCGTG CCTCACTATG TGATGATTGC AGGTTACGTG GGCGGTGGTG TCGCGCGGGG CTTGTGCGTT GGGTTAATCG TGACACTGGT GGCCATGTTC TTTGTCGATA TTAGTTTGCA CCATGCTGGT CTTGTCGTCA TGACGGTATT TTTAACCTCA GTGTTATTCT CCTTAGGTGG ATTAATTAAC GCGGTATTTG CCAAGAGTTT CGATGATATC AGTATCATCC CGACGTTTGT GCTCACGCCA TTAACCTACC TTGGCGGGGT ATTTTATTCT CTGTCTTTAT TGCCGGCTTT TTGGCAAGGC GTATCGGCGC TGAATCCCGT GGTCTATATG ATCAACGTGT TCCGCTACGG CTTTTTAGGC TTCGCCGATA TCAGTGTGCC CCTTTCAATC GGAATTATGG TGGGTTTTTG TGCTGCACTC TGGGGCGTTG CTTACTATCT TATTTCCAGA GGGATAGGAC TGCGTTCGTA G
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Protein sequence | MKQLYFIAFK SILTKEINRF TRIWVQTLVP PAITMTLYFL IFGNLVGSRI GEMGGVSYME FIAPGLIMMS VITNSYSNVA SSFYSAKFQR NLEELMVAPV PHYVMIAGYV GGGVARGLCV GLIVTLVAMF FVDISLHHAG LVVMTVFLTS VLFSLGGLIN AVFAKSFDDI SIIPTFVLTP LTYLGGVFYS LSLLPAFWQG VSALNPVVYM INVFRYGFLG FADISVPLSI GIMVGFCAAL WGVAYYLISR GIGLRS
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