Gene SO_3792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3792 
Symbol 
ID1171436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3943541 
End bp3944713 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content49% 
IMG OID637345562 
Producthypothetical protein 
Protein accessionNP_719329 
Protein GI24375286 
COG category[R] General function prediction only 
COG ID[COG4637] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAACCA CACTTGCCAT CTCTAACTAC CGCACCTTAA GGGAAATCGT CTTACCTCTG 
GGCCGGCTTA ATGTCGTCAC TGGTGCTAAC GGTAGTGGCA AATCTAATTT ATACAAAGCA
TTACGTCTAT TAGCGCAAAC GGCGCAGGGT GGAGTGGTGA ATGCGTTGGC ACTGGAGGGC
GGCCTAGATT CCTGTTTTTG GGCAGGGCCT GAGAATCTGA CCAAGGGCAT GTTAGCAGGT
GATACACCCA TCGAAGCGAC GGTAAGGCAA GCGCCAAAAC GCCTAAAGCT AGGGTTTGCA
GGGGAAGATT TTAGTTATCT GATTGAACTC GGCCTACCAA AACCCGATTC AACCACCCTC
TTTGGCTTAG ATCCCCAAAT CAAACGAGAG GCAATTTGGA ATGGTGCGAA ATACCGTCCA
GCAAGCGTCT TAGTCGAGCG CCGTGGCCCT ATGGTGAAAA GTCGCAGTCA AGATGGCCAA
GGCTGGATAA CCCTAAGCGC ACACCTGCAA AGCAGTGACA GTATTTTTAC CGAACTTGCC
GATCCAGAAC GCAGCCCTGA AGTGTTAAAA CTAAGGGATA GCATTCGTGC TTGGCGTTTT
TATGATCATT TTAGAACCGA TACCGATGCT CCGGCCCGCC GCCCTCAACT TGGCACTGCA
ACACCCGTGC TACACCATGA TGGTCGGGAT CTTCCCTCTG CCATACAAAC TATTTTTGAA
ATTGGCGATA AGAGCGCTTT TGACCATGCG GTGAGTGATG CCTTTCCGGG AGCCAAGGTT
CGTATCACGC CTCAAGCGGG CGGGATCCTA CAACTTGAAT TTCAGCAGCA AGGTTTATTA
AGACCCCTGT ATGCGAGCGA GCTATCCGAT GGCACACTGA GATATTTACT GTTAATTGCT
GCCCTGCTGA CACCAAGACC ACCAGAACTC ATGGTGTTAA ATGAACCCGA AACGAGCCTG
CATCCCGATT TATTACCCGC ATTGGCGAGA CTTATCGCTA AGGCGTCCGA GGTATGCCAA
TTATGGGTAG TGTCACACGC CAATCGATTA ATCAATGCCT TAAATCAGTT TGAAGAATGT
AATACCTTGG CTTTGGATAA AACCTTAGGA CAAACCCAAA TCTTAGGTCA GGATTTGCTC
AACACACCCA GTTGGCTATG GCAAAACCGC TAG
 
Protein sequence
MLTTLAISNY RTLREIVLPL GRLNVVTGAN GSGKSNLYKA LRLLAQTAQG GVVNALALEG 
GLDSCFWAGP ENLTKGMLAG DTPIEATVRQ APKRLKLGFA GEDFSYLIEL GLPKPDSTTL
FGLDPQIKRE AIWNGAKYRP ASVLVERRGP MVKSRSQDGQ GWITLSAHLQ SSDSIFTELA
DPERSPEVLK LRDSIRAWRF YDHFRTDTDA PARRPQLGTA TPVLHHDGRD LPSAIQTIFE
IGDKSAFDHA VSDAFPGAKV RITPQAGGIL QLEFQQQGLL RPLYASELSD GTLRYLLLIA
ALLTPRPPEL MVLNEPETSL HPDLLPALAR LIAKASEVCQ LWVVSHANRL INALNQFEEC
NTLALDKTLG QTQILGQDLL NTPSWLWQNR