Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3746 |
Symbol | htrB |
ID | 1171395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 3891551 |
End bp | 3892477 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637345522 |
Product | lipid A biosynthesis lauroyl acyltransferase |
Protein accession | NP_719285 |
Protein GI | 24375242 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
TIGRFAM ID | [TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCGAGA AAGCTGAGTT TTCATCATCT TTATATCATC CGAAGCATTG GCCCATGTGG TTTGGGGTGT TCATGATGCG AATCACCCAA GTGTTGCCTT TATCTTGGCA GATGAAATTA GGTAAAGGCA TGGGCCGATT AGTCAAGGCG CTTGCAGCAA GTCGCACCCA TACCGCCCGC TGTAATTTAG CCCTTTGTTT TCCCGATATG CCAGAGACAG AGCGGGAAGC GCTCCTCACC CGCAACTTTG AAGAAACCGG CAAAGCGATC TTCGATACCA TCAATGCTTG GTGGTGGTCC GATGAAAAGA TCCAGCAGCA CATGCAGATA ACAGGCAAAG AGTACGTTCA AGACACGTTA AATGCTGGTC ATGGCGTCAT CCTGTTTGCA GTACACTGCC TACCGCTCGA AATGGGCGCA CGTATTTTTG GTCAGTTTCA ACCCGGTGTC GGTGTGTACC GCCCCCACAA TAACCCCGTG ATGGAATACC TGCAGGTAAA AGGTCGTCTA CGCTCGAATA AAGCCTTAGT GCCTAAACGA GATCTACGCC AGATGGTGCG CTGTTTACGT AACCCCGATG TGATTTGGTA TACGGCTGAC CAAGACTTTG GCCGTTCAAG TGCAGTGTTT ATTCCCTTTT ATGCAGTGCC CGATGCCGCC ACGATTACTG GCGCAACCAC ACTGGCGAAG TTAGGTAAGG CCAAGGTATT ACCCTTCTTT GTTGAGCGTA CCGAAGGAGA TACAGGCTAC CGAATTGAAA TCATGCCGCC TTTGGATAAC TTCCCCGGTG AAGATGAAGT CGCCGATGCC ATTCGCGGTA ACAAGATTAT TGAAGAGATT ATTAATAGAA ATCGCGCCCA ATATATGTGG TTACACCGCC GCTTTAAAAC TCGTCCCGAT CCAACGGATA AGTCGCTATA TAAATAA
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Protein sequence | MVEKAEFSSS LYHPKHWPMW FGVFMMRITQ VLPLSWQMKL GKGMGRLVKA LAASRTHTAR CNLALCFPDM PETEREALLT RNFEETGKAI FDTINAWWWS DEKIQQHMQI TGKEYVQDTL NAGHGVILFA VHCLPLEMGA RIFGQFQPGV GVYRPHNNPV MEYLQVKGRL RSNKALVPKR DLRQMVRCLR NPDVIWYTAD QDFGRSSAVF IPFYAVPDAA TITGATTLAK LGKAKVLPFF VERTEGDTGY RIEIMPPLDN FPGEDEVADA IRGNKIIEEI INRNRAQYMW LHRRFKTRPD PTDKSLYK
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