Gene SO_3746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3746 
SymbolhtrB 
ID1171395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3891551 
End bp3892477 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content49% 
IMG OID637345522 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionNP_719285 
Protein GI24375242 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCGAGA AAGCTGAGTT TTCATCATCT TTATATCATC CGAAGCATTG GCCCATGTGG 
TTTGGGGTGT TCATGATGCG AATCACCCAA GTGTTGCCTT TATCTTGGCA GATGAAATTA
GGTAAAGGCA TGGGCCGATT AGTCAAGGCG CTTGCAGCAA GTCGCACCCA TACCGCCCGC
TGTAATTTAG CCCTTTGTTT TCCCGATATG CCAGAGACAG AGCGGGAAGC GCTCCTCACC
CGCAACTTTG AAGAAACCGG CAAAGCGATC TTCGATACCA TCAATGCTTG GTGGTGGTCC
GATGAAAAGA TCCAGCAGCA CATGCAGATA ACAGGCAAAG AGTACGTTCA AGACACGTTA
AATGCTGGTC ATGGCGTCAT CCTGTTTGCA GTACACTGCC TACCGCTCGA AATGGGCGCA
CGTATTTTTG GTCAGTTTCA ACCCGGTGTC GGTGTGTACC GCCCCCACAA TAACCCCGTG
ATGGAATACC TGCAGGTAAA AGGTCGTCTA CGCTCGAATA AAGCCTTAGT GCCTAAACGA
GATCTACGCC AGATGGTGCG CTGTTTACGT AACCCCGATG TGATTTGGTA TACGGCTGAC
CAAGACTTTG GCCGTTCAAG TGCAGTGTTT ATTCCCTTTT ATGCAGTGCC CGATGCCGCC
ACGATTACTG GCGCAACCAC ACTGGCGAAG TTAGGTAAGG CCAAGGTATT ACCCTTCTTT
GTTGAGCGTA CCGAAGGAGA TACAGGCTAC CGAATTGAAA TCATGCCGCC TTTGGATAAC
TTCCCCGGTG AAGATGAAGT CGCCGATGCC ATTCGCGGTA ACAAGATTAT TGAAGAGATT
ATTAATAGAA ATCGCGCCCA ATATATGTGG TTACACCGCC GCTTTAAAAC TCGTCCCGAT
CCAACGGATA AGTCGCTATA TAAATAA
 
Protein sequence
MVEKAEFSSS LYHPKHWPMW FGVFMMRITQ VLPLSWQMKL GKGMGRLVKA LAASRTHTAR 
CNLALCFPDM PETEREALLT RNFEETGKAI FDTINAWWWS DEKIQQHMQI TGKEYVQDTL
NAGHGVILFA VHCLPLEMGA RIFGQFQPGV GVYRPHNNPV MEYLQVKGRL RSNKALVPKR
DLRQMVRCLR NPDVIWYTAD QDFGRSSAVF IPFYAVPDAA TITGATTLAK LGKAKVLPFF
VERTEGDTGY RIEIMPPLDN FPGEDEVADA IRGNKIIEEI INRNRAQYMW LHRRFKTRPD
PTDKSLYK