Gene SO_3738 details

Gene Information

• Locus tag: SO_3738
• Symbol: cysJ
• ID: 1171388
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 3882734
• End bp: 3884557
• Gene Length: 1824 bp
• Protein Length: 607 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637345515
• Product: sulfite reductase (NADPH) flavoprotein alpha-component
• Protein accession: NP_719277
• Protein GI: 24375234
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0369] Sulfite reductase, alpha subunit (flavoprotein)
• TIGRFAM ID: [TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGTTAA AAGAACTTTC ATCACTGGCT TCACCCCTGT CGCAATCACA GGTCGATAAG 
CTGAAACAAC TCACCGCTGA ATTAAATTCC GTGCAACTTG CTTGGGTGAG CGGCTATTTA 
GCTGCAACGG CCAATACGAG TGGGAGTGCT ATCCAAGTCG CCGCATCCGT GACCGAGGCA 
CAAGCAGCGC AAACGGTGAC CATTCTCTAT GGCAGTCAAA CGGGCAATGG CCGTGGTATC 
GCCAAAGCCT TAGCCGAAAA GGCAAAGACA CAGGGTTATA GCGTAAATTT AGCCTCCATG 
GGTGAATACA ACGTGCGCCA GCTTAAGCAA GAAACCTTAT TGTTGCTGGT GGTGAGTACC 
CATGGTGAAG GTGAAGCGCC GGATGATGCG ATTGAATTAC ATAAGTTTTT AGCAACAAAG 
CGTGCGCCTC AATTAAACAA TTTGCACTAC TCGGTGTTGG CACTGGGCGA TTCGAGCTAT 
GAGTTTTTCT GCCAAACCGG TAAAGACTTT GATGCGCGGC TTTCAGCATT AGGTGCTAAA 
GCCTTATTGC CGTTGGTTGA GTGTGATGTG GACTATGAGG CTGCGGCCGG ACAGTGGCAC 
GCCGATGTTC TAACGGCGGT TAAGCCACTG ATCCAAACAA CGGCTAACGT GGTGGCGTTG 
AATGAAATTA ATTCAACTTC GGCGCAAGTT GCCAGCGAGA GCGAATTTAC TAAGCAAAAC 
CCTTACCGTG CCGAAGTGTT GGTGAGCCAA AAGATCACCG GGCGTGATTC AGACAGAGAT 
GTGCGCCATG TTGAAATTGA TTTAGGTGAG TCAGGCTTAC ACTATGAGGT CGGTGATGCT 
CTGGGTGTGT GGTTCAGCAA TAGCGAAATC TTAGTCGGCG AAATTTTAGC GGGCCTAGGG 
TTAGCGGCCG ATGCAAAAGT GACTGTCGGC AGTGAGTCAA TCAGCCTCAA ACAAGCCTTA 
ATCGACAAGA AAGAGCTGAC GCAGTTGTAT CCTGGTTTAG TCAAAGCTTG GGCCGAGTTG 
TCAGCGAGCA GTGAGCTTCT CGCCCTGAGT GAGGATAAAG AACAGCTGCG CCAGTTTATT 
CTAAATCATC AATTTGTTGA TTTAGTGACT AACTACAAGT TACCTGCTGA GGCAAATTTG 
GATGCGAATA AACTGCTTGA ACTATTACGC CCGTTAACGC CCAGACTCTA TTCTATTGCC 
TCTAGCCAGA CCGAAGTCGA TACCGAAGTG CATTTAACCG TGGCCTTGGT GGAAGATGAA 
CATCAAGGGC AAACGCGTTT TGGCGGTGCT TCTCATTTCT TAGCCTCGGC GCAGGAAGGC 
GCTGAAGTAA AAGTGTATGT TGAACCGAAC AAGCATTTCC GTTTACCTGA AAACCCTGAT 
ACGCCCGTCA TCATGATTGG CCCTGGCACA GGGGTTGCCC CATTCCGCGC CTTTATGCAG 
GAGCGTGTGG CACAGGGTGC GAAGGGCGAT AGTTGGTTAT TCTTCGGCAA CCCGCATTTT 
GAGCAGGACT TCCTGTATCA AACCGAGTGG CAACAGTATC TGAAAAACGG CGATTTAACC 
CGTATCGATG TGGCATTTTC GCGGGATCAA GCCCATAAGA TTTACGTGCA GCACCGCATC 
AAAGAGCAGG GGCAAGCCCT GTGGCAATGG CTGCAAAACG GCGCGCATCT TTATATTTGT 
GGTGATGCCG AGCGTATGGC TAAAGACGTA CACCAAGCCT TACTAGCGGT TGCGGTGGAG 
TTTGGCGGAC TGTCGAGCGA GGCGGCAGAA GAATACTTCG AGACCTTACG CAGTCATAAA 
CGTTACCAAA AAGACGTGTA CTAA 

 

Protein sequence

MLLKELSSLA SPLSQSQVDK LKQLTAELNS VQLAWVSGYL AATANTSGSA IQVAASVTEA 
QAAQTVTILY GSQTGNGRGI AKALAEKAKT QGYSVNLASM GEYNVRQLKQ ETLLLLVVST 
HGEGEAPDDA IELHKFLATK RAPQLNNLHY SVLALGDSSY EFFCQTGKDF DARLSALGAK 
ALLPLVECDV DYEAAAGQWH ADVLTAVKPL IQTTANVVAL NEINSTSAQV ASESEFTKQN 
PYRAEVLVSQ KITGRDSDRD VRHVEIDLGE SGLHYEVGDA LGVWFSNSEI LVGEILAGLG 
LAADAKVTVG SESISLKQAL IDKKELTQLY PGLVKAWAEL SASSELLALS EDKEQLRQFI 
LNHQFVDLVT NYKLPAEANL DANKLLELLR PLTPRLYSIA SSQTEVDTEV HLTVALVEDE 
HQGQTRFGGA SHFLASAQEG AEVKVYVEPN KHFRLPENPD TPVIMIGPGT GVAPFRAFMQ 
ERVAQGAKGD SWLFFGNPHF EQDFLYQTEW QQYLKNGDLT RIDVAFSRDQ AHKIYVQHRI 
KEQGQALWQW LQNGAHLYIC GDAERMAKDV HQALLAVAVE FGGLSSEAAE EYFETLRSHK 
RYQKDVY