| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3728 |
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| Symbol | cobA |
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| ID | 1171379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3871804 |
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| End bp | 3872634 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637345507 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | NP_719268 |
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| Protein GI | 24375225 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATTT TATCGTTACC GGGCCAAAGC GCGAAGGGTA AAGTCTGGCT GGTTGGCGCG
GGTCCCGGAG ATGTTGAGCT ATTAACTCTC AAGGCATGGC GTATCCTAAA GTCTGCCGAT
GCGGTGTTGT ATGATGCGCT CGTCAGTCAA GATATTCTCG ATCTAATCCC CAAAGATGCT
GAAAAAATTG CTGTCGGTAA GCGCGCTGGC AAGCATAGTG CGGCGCAAGA CGACATAAAT
CAGTTACTGG TGACTAAAGC CTATACCCGT AAAAATGTCG TGCGCTTAAA GGGGGGCGAT
CCCTTTATTT TTGGTCGCGG CGGTGAAGAG CTACAAACCT TGGTTGATGC GGGCGTTGAA
TTTGAAGTGG TACCCGGTAT CACCGCCGCC AGTGGCACAG CGGCTTATAC AGGCATTCCA
TTAACGCATC GGGATTATGC TCAAGGAGTG ACGTTTATTA CTGGCCATTG TCAGTTAGAA
AGCCGTCCAA TGGATTGGCA GGGTTATGCT AATCCAAACA ATACTTTGGT CGTATATATG
GGAATTTTGA ACGCGGGCGT GATCCGAGCT GGATTAATCA ACGCAGGTCG TAGCCCACAA
ACACCAGTGG CAATTGTTTC GAAGGCGACT ACTCAGTCGC AGCAACGTTT TATTGGGCAA
TTAGATTCAC TCGAACAACT CGCGGCCGAT CCCAAGTTGC AGATGCCCGC CTTAATGATC
ATTGGTGAAG TGGTGGGGTT GTCTGAAACC TTAAATTGGT TTCAACCTAA GGCCGAAGGC
TCGCAGTCGC TTGAAGCGTT AAATGCTCCC AAAGTCGCAG TAAAAATTTA G
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| Protein sequence | MEILSLPGQS AKGKVWLVGA GPGDVELLTL KAWRILKSAD AVLYDALVSQ DILDLIPKDA
EKIAVGKRAG KHSAAQDDIN QLLVTKAYTR KNVVRLKGGD PFIFGRGGEE LQTLVDAGVE
FEVVPGITAA SGTAAYTGIP LTHRDYAQGV TFITGHCQLE SRPMDWQGYA NPNNTLVVYM
GILNAGVIRA GLINAGRSPQ TPVAIVSKAT TQSQQRFIGQ LDSLEQLAAD PKLQMPALMI
IGEVVGLSET LNWFQPKAEG SQSLEALNAP KVAVKI
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