Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3624 |
Symbol | |
ID | 1171285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3783622 |
End bp | 3785106 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637345416 |
Product | flavocytochrome c flavin subunit |
Protein accession | NP_719167 |
Protein GI | 24375124 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTATC TGAAAATCAT CAGGGGATTC TTCAGGGCAT TGGTACCATT TTCTGCGAAC GCGAATACAG CAGGAGTTAA ATGGGATGAA ACCTATGAAA TAGTCATTGT AGGCTCAGGC TTTGCTGGAT TAGCCGCAGC CATTGAAGCG GGAAAATTAG GTGCCAAGGA AGTTGTTGTT TTAGAAAAAC TCGGTGTTTA TGGTGGTAAT TCTGCGTTAA ACGCAGGTCA AGCTTGTTTT GCTGGTACCG ACATACAAAA AAAACACGGG ATTGAAGATA GCCCAGACCT AATGGTCAAA GATCAACTTA TATCAGGGCG TGGTTATGCT CATGAAGATT TATTACGGCA CAGTGCAGAG CTAGGTGCTT ATATTTATCA GATGACAAAA GATTGTGGTT GTGTTTACCG AGACCACATT ATTAATACGG GGGGCACTAG TGCTAACCGT AGTCACCAAG TTGTTGAAAG ATCCGGTGCG GGTTTTATTC GCCCGATGCT TAAAACGGCG CGTAGTTATG GTGTAAAAAC TAAAACTCGA CACAAGTTTG AACATCTGAT CACCGCTGAT GATGGCACAG TGCTTGGCAT CCAAGTTCGT AAAGATTATC ACTTTGGCCA TGAAGACTCC GGCAAACTTA TTAATATAAA AGCAGAAAAA GGCGTATTGA TTGCCACTGG AGGCTTTGCT GCTAACGTCG CCTTCCGTCA AGCACTTGAC CCTACATTAG GTAGCGAAGT GGGTTGTACG AATGCGCGTG GGGCAACGGG TGATGGTTTA ATTGCCATGC TTGCTGAGGG GGCGATGCCA GTAGGGTTAA GCTTTATTCA GTCAGGTCCA TGGGCATCCC CTGATGAAGG TGGCTTTGGC TATGGTTCCG GTTTTTCCTT ATACAACTTC CCACATTCTA TTGCTATTGA CCGTAATACC GGCATGCGTT TTATGAATGA AACTGCCGAT CGTAAAACCC GTGCTGATTT AGAGATTCAA CGCCGCGATA AAGAAGGTAA ACCTAACCCC GCACTGTTAA TTGCGCCTAA ACATGAGGCT CAAAAAGATC CATCGATGGA AAACGTGCTG AAGTATAACG TCGCTTGGGA ATTCGACAGT GTTGAAGCGA TTGCTAAACA CTTCAACTTG CCAGAAGAAG CCTTCAAAAA ACAGGTAAGT GATTGGAACG AATACGTTAA AACCGGTGTA GATCCGCAGT TTGGCAAACG TATGGACATG GTAAAAGACA TCTATCTTAC TCCGCCGTTT ATTGTGCAAC GCTTGTGGCC GAAGGTGCAC TATTGCCAAG GCGGTATCCA AATCAATACC AAAGCAGAAG TGATTGCAGC CAAAAATGGT AAACCTATTC CTAAGCTGTA TGCCGCTGGT GAAGTGACAG GGGGAGTCCA TGGGGTGAGC CGGCTAGGGG GATGCTCGAC GCCTGAATGT ATGGCGTTTG GTGTGACAGC TGCTCGTTCG ATGATGAAAG CATAG
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Protein sequence | MIYLKIIRGF FRALVPFSAN ANTAGVKWDE TYEIVIVGSG FAGLAAAIEA GKLGAKEVVV LEKLGVYGGN SALNAGQACF AGTDIQKKHG IEDSPDLMVK DQLISGRGYA HEDLLRHSAE LGAYIYQMTK DCGCVYRDHI INTGGTSANR SHQVVERSGA GFIRPMLKTA RSYGVKTKTR HKFEHLITAD DGTVLGIQVR KDYHFGHEDS GKLINIKAEK GVLIATGGFA ANVAFRQALD PTLGSEVGCT NARGATGDGL IAMLAEGAMP VGLSFIQSGP WASPDEGGFG YGSGFSLYNF PHSIAIDRNT GMRFMNETAD RKTRADLEIQ RRDKEGKPNP ALLIAPKHEA QKDPSMENVL KYNVAWEFDS VEAIAKHFNL PEEAFKKQVS DWNEYVKTGV DPQFGKRMDM VKDIYLTPPF IVQRLWPKVH YCQGGIQINT KAEVIAAKNG KPIPKLYAAG EVTGGVHGVS RLGGCSTPEC MAFGVTAARS MMKA
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