Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3559 |
Symbol | gshA |
ID | 1171230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3716992 |
End bp | 3718686 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637345358 |
Product | glutamate--cysteine ligase |
Protein accession | NP_719106 |
Protein GI | 24375063 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCTTGTC CCATGGACAG ATTTAGATTT ATTTTGAAGT GTATTTTGAA AGATAAGCCT CAAAATAAAG GTCTTACTGT TAACCTTGTC GCGATAGCGA ATAACCAACC AGAGAAGCGC AAATTGAAGC CATTCAATGA ATTAGTACAA CATTTCTCGG ACGCTCAAGG GCGCGCCGCA CTTCTTGGCA TGTTACGTGG AATTGAGCGT GAAGCGTTGC GTATTGATGA GTCTGGTTAC TTAGCGCTAG ATGGTCATCC CCTCGAGTTG GGGTCGGCAT TAACCCACTC GCGTATTACG ACGGACTACA GTGAAGCGCT GCTTGAATTT ATTACGCCTG TTAATCATCA GGTTGAGTCG CTATTGCAGG GATTAACTGA GACCCATGCC TACAGTGTGC GCCATTTGCA TGGGCAGCGG CTGTGGCCTG TCAGCATGCC CTGCTATGTT AAAGATGAGG CGAATATCCC CATTGCTCGG TACGGAACAT CTAATACAGG TAAGATGAAA ACCTTGTATC GTAAGGGCTT AACTTACCGT TATGGCGCCC TCATGCAGAT TATCTCTGGG GTGCATTTTA ACTTTTCGGT GTCGCAAGAA CTGTGGCAAA GTCTCTATGA ACTGAGCGAT AAAAGCTTGA GCTTTGATGA CTTTATTTCA GAGTCTTACT TTGGTCTTAT CCGTAATTAT CGCCGTTTAG TTTGGGTCTT ACCTTATCTG TTTGGTGCTT CACCAGCGCT GTGTAACTCG TTTATCAAAG GCCAAAAAAC CGATTTACGC TTTGAGAAGT CGGGACGAGG CACTTTGTAT TTACCCTATG CAACGTCGCT GCGGATGAGC GATCTGGGGT ATACCAATAA AGAGCAGGCC GACCTCAATA TCAGCTACAA CTCCCTGCCA GAGTATCTTG CGGGGATTCG AGCTGCGATT AAGATGCCAT CGGCAAACTT TGCCAATATT GGCGTTAAGG TTGATGGTGA ATATCGTCAA CTCAATGCTA ACGTGCTGCA AATTGAGAAC GAATTTTACT CACCCATCCG TGCTAAACGG GTGACAAAAA GTGGTGAGAA ACCCTCTGAG GCCCTTGCTC GCGCTGGGGT GGAATATATT GAGGTGCGTG CATTAGATGT CAATCCCTTT AGCCCTATTG GGATTGAGGC AAGCCAAGTG CGCTTCCTCG ACTTATTCTT ACTCTATTGT TTACTAACAC CATCACCTAA GTCAGATGCC GCTGAAGAGG CACGATTAAG CGCCAACTTA AAGTCAGTGG TACTTGAGGG ACGTAAGCCC GGACTCGAGC TGCACACGGC AACGGGAACA TTATCATTAC AGACATGGCT CTTGGAGCTA TTTGATAACT TATCGTCACT GGCAGTATTA CTCGACGGTG AAACGAATGC TTATCAAGCA GCCTTAGCCC ATTGGCGAGA CGCTGTGGTT GATCCGCAGA AAACCTTGTC TGGCCAAGTT CTTCAGCAAT TGGTTACTAA AGGGCAAGAT CATGGGCAGT GGGTGATGTC TTTGGCACAG CAATACCATC AATATTTCAT CGATTACCCA TTATCCTCAG AAGCAGCAAG TGATTATGAC GCTGAGGCGC AAAGTTCGTT AGCCAAACAA GTGGAATTAG AGGCTGCACA GAGCGCGGTA TCCTTAGATG ATTATCTGAC TGACTATTTC GGTGCGCCAG CCTAA
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Protein sequence | MACPMDRFRF ILKCILKDKP QNKGLTVNLV AIANNQPEKR KLKPFNELVQ HFSDAQGRAA LLGMLRGIER EALRIDESGY LALDGHPLEL GSALTHSRIT TDYSEALLEF ITPVNHQVES LLQGLTETHA YSVRHLHGQR LWPVSMPCYV KDEANIPIAR YGTSNTGKMK TLYRKGLTYR YGALMQIISG VHFNFSVSQE LWQSLYELSD KSLSFDDFIS ESYFGLIRNY RRLVWVLPYL FGASPALCNS FIKGQKTDLR FEKSGRGTLY LPYATSLRMS DLGYTNKEQA DLNISYNSLP EYLAGIRAAI KMPSANFANI GVKVDGEYRQ LNANVLQIEN EFYSPIRAKR VTKSGEKPSE ALARAGVEYI EVRALDVNPF SPIGIEASQV RFLDLFLLYC LLTPSPKSDA AEEARLSANL KSVVLEGRKP GLELHTATGT LSLQTWLLEL FDNLSSLAVL LDGETNAYQA ALAHWRDAVV DPQKTLSGQV LQQLVTKGQD HGQWVMSLAQ QYHQYFIDYP LSSEAASDYD AEAQSSLAKQ VELEAAQSAV SLDDYLTDYF GAPA
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