Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3462 |
Symbol | recN |
ID | 1171138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 3607978 |
End bp | 3609636 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637345268 |
Product | recombination and repair protein |
Protein accession | NP_719011 |
Protein GI | 24374968 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0497] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTGCC AACTCAGCAT CAATAATTTC GCTATCGTCC GTTTTCTCGA ACTGGATTTT AGCCCCGGTA TGACCAGCAT TACCGGCGAA ACTGGTGCCG GTAAATCCAT CGCCATCGAC GCCTTAGGCC TGTGCCTAGG CAATCGCGCC GATGCCAGCA GTGTCCGTCC TGGCGCGAGT AAAACCGAAG TCAGTGCCCG ATTTTCGCTA CACGATGTTC CCCTTGCTAA ACGTTGGCTC GAGGATAACG ATCTCGAACT TGATGACGAA TGTATTCTAC GGCGCACCAT TGGTAGCGAT GGCCGCTCAC GCGCCTATAT TAATGGCAAT CCCGTACCTT TAACTCAACT CAAATTACTC GGGCAATTGC TTGTGGGGAT CCATGGTCAG CACGCCCACC ACGCCATGCT AAAGAGTGAA CATCAACTAA CCTTGCTCGA CAGCTATGCT AACCATAGAC TGCTGATTGA TACCGTCACG GCCAGTTATC AACGCTGCAA ACAAATCGAA GCTGAACTCA AGCAATTAGA AGCCTCGCAG CATGAACGTA TTGCCCGTAA ACAGCTGGTG CAATATCAAG TTGAAGAGCT AGATGAATTC GACCTCAAGG TCGGTGAATT TGAAGAAATT GAGCAAGAGC ATAAACGCCT CGCCAATGGC ACTGAACTGG TGGATAGCTG CCAAGCCAGC CTATATTTAC TCACTGACGG CGAAGAGAGC AATATTGAGT CACTGCTTAA CAAGGTAGTA AGCCTTGCCG AAAACCTGCA AAGCTACGAT CCTGCATTGA CCAATGTCAG CACTATGTTG AATGAAGCCC TCATTCAAGT ACAAGAGAGT GCAGGAGAAT TACAGCATTA CCTGAGTAAA CTCGAACTCG ATCCAGCGTA TTTTGCCTAT CTAGAGGAAA GACTCTCAAA GGCCATGCAA CTGGCACGTA AGCACCATGT CAGCCCTGAC AAATTAGCCG AGCATCATTT GGCACTCAAA GCGGAACTCA CAACCCTCGA TGACGATGAA ACTAAGTTAG AGGAAATCCA ACTCCAAGTT GAAGCGAGTA AATCAGCTTA CTTAGCAAAC GCACAAAAAC TGAGTCAGAG CCGCGCGCGC TATGCAAAAG AGCTGGATAA ACTGGTGACT CAATCCATCC ACGAGCTGAA TATGCCCAAG GGTAAGTTCA CTATTGAAGT TAATTTTAAT CCCGAGATTA TGTCGGTAAA TGGTAGCGAT AACATAGAGT TTATGGTCAC AACCAACCCA GGACAGCCTT TACAACCGAT TTCACGGGTT GCCTCTGGCG GTGAATTGTC TCGTATCGGT TTAGGGATCC AAGTGATAAC CGCCAAGAAA GTAGCCACTC CTACCCTTAT TTTTGATGAA GTGGATGTCG GAATTTCAGG CCCGACCGCT GCTGTGGTTG GCAGAATGCT GCGTAGCTTA GGGGAATCGA CTCAAGTACT TTGTGTAACC CATTTACCTC AAGTTGCAGG TAATGGTCAT CAACATATGT TTGTGAATAA ATTCAACAAG GCGGGAAGTA CAGAAACCAC AATGACGCCT TTGGATAAGG AGCAACGTAT CCAAGAATTA GCCAGACTTC TCGGTGGCGA CACGATTACC TCTAACACTC TCGCCAATGC ACGAGAACTA TTACAGTAA
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Protein sequence | MLCQLSINNF AIVRFLELDF SPGMTSITGE TGAGKSIAID ALGLCLGNRA DASSVRPGAS KTEVSARFSL HDVPLAKRWL EDNDLELDDE CILRRTIGSD GRSRAYINGN PVPLTQLKLL GQLLVGIHGQ HAHHAMLKSE HQLTLLDSYA NHRLLIDTVT ASYQRCKQIE AELKQLEASQ HERIARKQLV QYQVEELDEF DLKVGEFEEI EQEHKRLANG TELVDSCQAS LYLLTDGEES NIESLLNKVV SLAENLQSYD PALTNVSTML NEALIQVQES AGELQHYLSK LELDPAYFAY LEERLSKAMQ LARKHHVSPD KLAEHHLALK AELTTLDDDE TKLEEIQLQV EASKSAYLAN AQKLSQSRAR YAKELDKLVT QSIHELNMPK GKFTIEVNFN PEIMSVNGSD NIEFMVTTNP GQPLQPISRV ASGGELSRIG LGIQVITAKK VATPTLIFDE VDVGISGPTA AVVGRMLRSL GESTQVLCVT HLPQVAGNGH QHMFVNKFNK AGSTETTMTP LDKEQRIQEL ARLLGGDTIT SNTLANAREL LQ
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