Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3391 |
Symbol | |
ID | 1171069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 3530959 |
End bp | 3533379 |
Gene Length | 2421 bp |
Protein Length | 806 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637345196 |
Product | ATP-dependent protease, putative |
Protein accession | NP_718945 |
Protein GI | 24374902 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1067] Predicted ATP-dependent protease |
TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTACCG TGCCTACAGT CGTACCCGCC ATCCCATTAA CGAGTCAGCA GATTTATCGA AGGTCCGAAC TTCAACAGCT TAGTGCTGAA TGCCACTCTA CTGCCCAGCT CACGCCACTT GATGATATTG TCGGTCAAGA ACGCGCCCAG CAGGCGGTAG AATTTGCCAT GGGGATCAAA GAAAAGGGCT ATAACATTTA CGCTATCGGA CAAAATGGTC TCGGTAAACG CACCATGATG TTGCGCTATC TCAATCGCCA TGATCCGATT GAACCCGCGT TATTTGACTG GTGCTATGTG GTGAACTTTG ACGATACCCG TAGCCCCAAA GTATTAAAAC TCACCGCAGG TACGGGGCTA GAATTTAAGA AATCCATCGA AAAACTTATG CTCAAATTGG TGAGGGCATT ACCCTTAGCC TTTGATAACG AAATGTATTA TGCAAGGGCA GAAAAACTCA AAAGCCAACT GACACAAAAA CAAGAAGCCG TACTCACAGA GTTAAGTGAA GAAGCAAAAC AAAAAAACAT TAGTCTGAGT TTAACCATGC AGGGGGATTA TCAAATGATC GCCCTCAACG GTGACGAGCC CCATGATGAA GCCACTTTCA GCGCCCTCAC TGAAGCCGAG CGTAATCAAT TTGAAAGTAA TATCAATGGG CTAGAAGTAA AACTAAGAAG CATTATCCGC CAAAATACCG AATGGGAAGA AGAGTTTAGT GATACCCAGC AGGAACACGA TGAACAAGTT GCTAAGGATG TGTTGGTACA CTTTTTTAAA CCTTTGAAGG ATAAATACAA ACACCAACCT GATGTCAGAG CATTTTTAAC CGGCATGCAG GCAGATATCC TAAGTAATTT AGATATTTTC CTTGAAGAAA GTGAAGAACA ACTCGCCCTT GCCTACGCCT CACTTGAAAA GAAAATGCCC CGCCGTTATC AGGTCAATGT ACTTGTGAGC CAAGGCGAGC AGAAATACCC CATCGTCGTA GAAGAAAGCC CTAGCTACCA CAGCCTGTTT GGTTATGTTG AAAACGCCAC CTTTAGAGGC ACAGTGTTTA CCGACTTCTC ATTGATCCGC CCTGGTAGCT TACACAAGGC AAACGGCGGC GTACTGTTAA TGGACGCCAT AAAAGTGCTT GAACGCCCCT ATGTTTGGGA TGGTTTAAAG CGAGCATTAC GCTCTCGCAA GTTGGATCTG AGTTCATTAG AGCGGGAAGT CTCACTGTCG GGCACCATTT CATTAGCACC GGAACCGATC CCGCTGGATG TAAAAATCAT CCTATTTGGT GACCATGAAA CCTATCAACT ATTACAGCAT TATGATGCTG ATTTCATTGA ACTATTTAGG GTAACTGCCG ACTTTGAAGA TGTCATGGAC AGAAGTGACG CCTCCGAAGC CCACTACGCC CGATTTATTT CCAGTATCGT CCACGATAAC AACATGTTGC ACTGCGACCG CAGCGCCATT GCACGCATCA TTGAATACAG CTCACGTGAG GCGCAGGATC AACAAAAGCT CTCGCTCCAC TCCGCCAATA TTGCCAACCT ATTACGGGAA TCAAACTTTT GCGCTAAAGC CGTATCAAGT AAGCGAATTG AAAAACAACA TGTTGAACAA GCGCTAAAAA ATCAACAGAA GCGCGTCTCC CGTCTACACG ACAATATTAT GGAAAGCTTT GTTAATGGCA CGACGCTAAT CAATACTCAC GATAAAGTCG TTGGTCAAAT CAATGCATTA TCTGTTGTTT CCACTTCAGA ACATCAATTT GGTCTGCCTA ATCGTATCAC TGCCACGACT GCTTATGGCA AGGGGGAAGT CCTGGATATC GAACACAGGG TCAAACTTGG TGGGCGTATT CATTCTAAGG GCGTACTGAT CCTCACCGCC TATTTAGCCT CGGTGTTAGG TAAAACCGCG CAAATTCCCC TCACCACTTA CCTCACCTTC GAGCAATCCT ACAGCGGTGT CGATGGTGAT AGTGCTTCAA TGGCCGAATG CTGTGCCATT ATCTCGGCCA TCAGTGAGTT GCCCTTAAGA CAAGATATTG CCATTACTGG CTCAATGAAT CAGTTTGGTG AGGCTCAACC TATCGGCGGC GTTAATGAGA AAATTGAAGG CTTTTTCGAT GTGTGTCAAA TCAAGGGCAG AACCTCGAGT CAAGGGGTGA TTATTCCCGA GTCGAATATC GCTAACTTAA TGTTACGCCA AGATATTGTT GAAGCAGTTG AACGTGGTGA ATTCCATATT TGGGCGATTA ACCATGTCAC TCAAGCGATG ACCTTGCTAT TAGGTAAAAC CGCAGCAACA GTACAAACCA ATGAGAGTAA ACACATAGAT CAATATGCAC CGGAGTGCAT TTTTGGCATT GCCCAGCAAA AACTTAATGC CTTAAGAGCA CTCAGTAAAA CCAATTCATA G
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Protein sequence | MPTVPTVVPA IPLTSQQIYR RSELQQLSAE CHSTAQLTPL DDIVGQERAQ QAVEFAMGIK EKGYNIYAIG QNGLGKRTMM LRYLNRHDPI EPALFDWCYV VNFDDTRSPK VLKLTAGTGL EFKKSIEKLM LKLVRALPLA FDNEMYYARA EKLKSQLTQK QEAVLTELSE EAKQKNISLS LTMQGDYQMI ALNGDEPHDE ATFSALTEAE RNQFESNING LEVKLRSIIR QNTEWEEEFS DTQQEHDEQV AKDVLVHFFK PLKDKYKHQP DVRAFLTGMQ ADILSNLDIF LEESEEQLAL AYASLEKKMP RRYQVNVLVS QGEQKYPIVV EESPSYHSLF GYVENATFRG TVFTDFSLIR PGSLHKANGG VLLMDAIKVL ERPYVWDGLK RALRSRKLDL SSLEREVSLS GTISLAPEPI PLDVKIILFG DHETYQLLQH YDADFIELFR VTADFEDVMD RSDASEAHYA RFISSIVHDN NMLHCDRSAI ARIIEYSSRE AQDQQKLSLH SANIANLLRE SNFCAKAVSS KRIEKQHVEQ ALKNQQKRVS RLHDNIMESF VNGTTLINTH DKVVGQINAL SVVSTSEHQF GLPNRITATT AYGKGEVLDI EHRVKLGGRI HSKGVLILTA YLASVLGKTA QIPLTTYLTF EQSYSGVDGD SASMAECCAI ISAISELPLR QDIAITGSMN QFGEAQPIGG VNEKIEGFFD VCQIKGRTSS QGVIIPESNI ANLMLRQDIV EAVERGEFHI WAINHVTQAM TLLLGKTAAT VQTNESKHID QYAPECIFGI AQQKLNALRA LSKTNS
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