| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3380 |
|---|
| Symbol | |
|---|
| ID | 1171058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 3518664 |
|---|
| End bp | 3519455 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637345185 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_718934 |
|---|
| Protein GI | 24374891 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3496] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAGC TCAAGAGTGG TATTTACTAT GGCACGGTGA CGCATAGTCG CTTTATGCCT
ATAAAACATC ACTTTAGCTA CGAAATGGCG TTGCTGGCGA TTGATTTGGA TGAGGTTGAT
TCTATCAGTC GTATGGGGCG GATATTTGCC AGTCAGCGCC GCGCCTTGTT GCGATTTAAT
CCTGCGGACT ATCTCACCAC GTTTACCTCA AAGGACAATC TTAGCCGTAA ACTCGACGTA
GAGGAGCCGA GTGCTTCAGC CCTCAAGAGC CGAGTACTTC AGCAAGTGGC AGAATTAGGT
GGCGAAAAGC GATGTAATCG AGTGCTATTT GTTGGACAAA TTCGGCATTT TGGTGTGTAT
TTTAGTCCGG TAAATTTTTA CTTTTGTTAT CAAAACCAAA TACCTTTATA TATGCTTGCT
GAGGTGAGCA ATACACCTTG GGATCAAAGG CACTGTTATT TAGTGGATTT GTCCGTCTCT
AACACCACTG ATAAAGTGTT CCATGTTTCC CCCTTTATGG ACCTCGACAT GCGCTACAAG
TGGCATGTTG AGCCCCCCTC TGAACGCTTA AATATTGGAA TTGAAAATCT GCCGAATCAT
TCAGGCAAGC GTTTATTTAA TGCAACGCTT TCAATGAGTC GCCAAGAAAT TAATGCCGCA
TCACTTCGCA CACTGTTGTT TCGCTTCCCT TTTATGACGC TGAAAATTTT CGGTGGGATT
TATTGGCAGG CGTTAAAGCT GTTCTACAAA CGAGTGCCTT TTGTGCCACA TCCTGCTCAA
ATGGAGAAAT AA
|
|---|
| Protein sequence | MSQLKSGIYY GTVTHSRFMP IKHHFSYEMA LLAIDLDEVD SISRMGRIFA SQRRALLRFN
PADYLTTFTS KDNLSRKLDV EEPSASALKS RVLQQVAELG GEKRCNRVLF VGQIRHFGVY
FSPVNFYFCY QNQIPLYMLA EVSNTPWDQR HCYLVDLSVS NTTDKVFHVS PFMDLDMRYK
WHVEPPSERL NIGIENLPNH SGKRLFNATL SMSRQEINAA SLRTLLFRFP FMTLKIFGGI
YWQALKLFYK RVPFVPHPAQ MEK
|
|---|
| |