Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3302 |
Symbol | |
ID | 1170989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3448058 |
End bp | 3451921 |
Gene Length | 3864 bp |
Protein Length | 1287 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637345112 |
Product | serine protease |
Protein accession | NP_718856 |
Protein GI | 24374813 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAATA AATCATTTAT CGCGATTGCC ATTGGACTTA CCGGCATATC TCAAGCGAGT CAAGAAAATC TAAAAGCATA TAGTTGGCAG AATAAAGTTA ATTATGTCAT CAACGCTGAT GCTGACGTTA GAGCTGATCA CTCTGGCCGT AGTCGTTACA TCATACAATT AATGCAAGCT CCAGCTGCAA CACACGCTGC GCAATTATTT AATAAAGCAC CACAGGATAG GACGAGTGTT AGTAAAGCAT CTATCACGCA GAAATTACCG CAAAAGATAA GTCATCTCCT ACAAACATCT CAATTAGAAC AATATCGTCA AGAGATTGCT CATCATCAAG GTATATTTAA AACGACAGCG AGTAAAACTC TTGGTCGGCC TTTGCAAGCA AAAATGCAGT TCGACACGGC CTTTAACGGT ATGGTGTTAG AGTTAACGCC AGATGAAGCA AAAACAATGC TGACAGTACC ACAGGTATTG AAGGTGATTA AAGAAACACC AACTGAACTC CAAACGGATA ATGGTCCGCA ACTTATTGGG GCGAGTAATC TTTGGGATGG AAATGCGACG GGTCTCGCTG CAAAGGGGGA CGGGATAATC ATTGGTATCT TAGATACAGG GATTAATACG GATAATCGTG CATTTTCTGC TGTCGGAGAC GATGGCCACA ACATCATTAA TCCGCTCGGC TCTGGCAACT ATTTGGGCGA TTGTGTCAAA GATGCCACCT TGTGTAATGA CAAACTGATA GGAGTATATA GTTTTCCTTT AGTTACGGAT GAATATAATG GATTGCGTCC AGCAAATGGT GAAGATTATA ACGGTCACGG CAGTCATACC GCTTCAACTG CTGCGGGAAA TGCATTAGTC AATGTACCTG TGTTAATGCC CAATATTGGT GAGGAAGTGG GAGATGGGAT TGAAACTGGC ACAGTACTTT CTAATATCTC CGGTGTTGCC CCGCACGCAA ACATCATTTC TTATCAAGTT TGCGACCAAT CAGGTTGTTA CCCGAGCCTG ACGATAGCCT CTGTCGAGCT AGCGATAAAA GCAGGGGTAG ATGTGTTGAA CTACTCTATT GGCCCCCGTG GAGGGGTTCA GAATGATCCC TGGAATACAG CATCGGATAT TGCTTTTTTG TCTGCCCGTG AAGCTGGCAT TTTTGTGGCT ATGGCCGCTG GGAATGCGGG GCCTGATGCT GAAACTGTTG GAAATGTGGC ACCTTGGGCG ATTTCAGTTG CCGCAAGTTC TCATCAAAGA GTTTGGAGTC ATGTACTGAG TGGCTCCGGA GTGACTGGAG ATCCTCTACC CCAAATAGAA GGTTTGGCTG ATGTATTTAC CAGTAATGGA GTGATCAATG CTCTCAGCGA TGAAACCGAA ATAGTGTATG CAGGTGACTA CAAAGATATA AACGGCAATT CGCTTGCCCT ATGCAATAGT CGAGTTTATT TTTTTGATCC TGTGATGGCA GATTTAAGAG GTAAAGTGGT TATATGTGAT CGTGGTGAAA TTTCCTTAGC AGACAAAGTG ACGAATATGT TCTTTGCCGC TGGGGTCATC ATACGTAATA CCCCTACTTC TAACCAGAAT ATGGCTAGCG CTCGTTATGC ATTGCCTTCA TTACTCATCA ATGAGTTAGA TGGCAAACAG TTGTTGGAAT GGATGAAGCG CACTGACACT CCTAAGGTGA GCATTAGTGC TGCAAATGCA GAGTATGATC AAGCTAATGC GGATATTTTA GCGGACTTTT CATCAAGGGG GCCTTACAAA TGGCAAACTG AGTTGATGGT TCCACATATT GCCGCACCAG GTGTTGATAT CTATGCTGCT TATGCGGATG AAATGCCATT TACTTCCGTT AATGATGCAG CCCCTTCGGA TTTTGCCTTC TTAAGTGGCA CCTCTATGGC TTCTCCGCAT GTTGCTGGTA GCGCAGCGTT ATTACGTCAA CTTCACCCAG ACTGGACTCC TGCTGAGATC CAATCTGCAA TGATGCTGAC TGCAACGACT AATGTCTTAA AAGAGGATGG CAAAACGCCA GCAGGTATTT TCGATATAGG CTCAGGTAGA CTTCAAATCG ATAAAGCCGC GCAGGCTGGA CTCGTTATGG ATGTGCCTAT CGATGAGTAT AAGGCGGCAA ACCCAGAATT AGGCGGAGAT GTGACATCAC TGAACCTGCC AGTGCTGACT TCAACTCAAT GCATGAACTC CTGCAGTTGG ACTCGTACCT TACGTGCAAC ACGAGATGGC AGTTGGACTG TATCAAGTAA CGGTAATGTC GATGGTGTCA CTATTTCTGC TTCCCCTTCG AGTTTTGATA TCAAAGAAGG GGAAAGTGTG ACTGTTACTT TTACGGCAAA TATAGCGTTG CGTGCGAACG AGGATTGGAG CTTTATGCAA GTCAATTTAG CTCCCTCTGA TAATTCACCA ATGTTATCTT TACCAGTAGC GGTAAAACCC TTAATCGCAT TAGTTCCTGC ATTTATCACC CAAGATTATT TTTGGAATAA AGGTGACCTA GAACTAGCCG ATTTTCACTT TCGTTATCCA GAAAATTTAC TTTTCAATAT AAAACCGCTG GAGAAGGCAA CCTCTTATCA TTTAACGCTT GCTGCGGATT CTGATAATCG CTCACCGTTT GATAACGTTA ATGACGGCAC CGCGCTAAGT TTTATAAATG TACCTGATGG TTCAAGCAAT TTGCGTGTCA TTGTGGGGGA ATCAAGCGCA ATAGATATTG ATGTTTTTAT TGGGTTAGAC AGTAATAACA ATGGCATACC TGAAATAGTG GAATTAACTC AGGCATGTGC CACAAGTATG AATGTTGGCG AAGCTTGTCG TTTAAATGCG GGAAGTGGCC GTTATTGGGT ATTAGCACAT AATTATAAAG GAAGTGGTGA TCCATTAGAC GCTGTTAGAC TTGACGTGCT GTTACAGCCA AATACCGAGA CTTTGCCAGC ACTGGTAACC ATTCCAAATA TGTCCACAAA GCCATATGAC GCATTAAGCG CTCATTTAAG CTGGAGTGGC GATATGATTG AAGGGGTTTA TTACAGTGAG CTGGAAGTTT TTGACCGAAA TACACCAACA GCTGCACGAG CTATTGCTCG TAGTAACCTA GTGGTTAATC GAGTAAAACC CTCAGTGAAA ATAGACTTAG TTAAAGGTGA CTTAAGTCAT AGGAAAGAGG CTGAACTTAA TATCCAACTT CCGACTAACC CGACATCAGA TTCGCTAACC TATACGCTTA ATTTAGCTAT GGCTGATAAT TTAACCATAA CGGATGTCGA AACGAATGGA GACATAAGTT TAAATCATGA CAAAAATAAT ATTAAGGTGA CATTAGCGCC GGGTGAGACT AGTACGCTTA TTGTTGCAAA AATCAATCAA AAATCCCCTA TAAGTGGTGA CTTTAAGGTT GATTGGTCAC TCAATACGGA TAAATCAGAT TTTGATGTAC AGCAAGGCAG CTTGATGGTT AGTAATACAA ATAAGGCACC AAGCCTTGCT GTTCCAAAAG AAATCAAAGG CAATATGGGG AGTGATGTTA AATTCAACAT TGTGTCGGAG GATGCAAATC AAGATCCTCT GTCCTACACT GTCACCCAGA TAAGTGGTCC GGCAGTGGAT ATTAAAGATG ACGGTAAAGG TGAGGTGATT TTAAGTTTAC CTGAGGTGAA TTCAAGCCAA GTTGCAAAGT TCAACGTTAA TGTCACTGAT GGCGAATTCA GTCAAAGCAG TGATATGTCA CTAGAGATAA CCTATATCAA TACTGAAAAT AGCGGTGGGG CAATATTTTG GAGTATCGTC CTGCTAGGAC TCTTCGGCCT GCGCCGTAAA CGTCTACGTA CTAGGTCATA CTAA
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Protein sequence | MFNKSFIAIA IGLTGISQAS QENLKAYSWQ NKVNYVINAD ADVRADHSGR SRYIIQLMQA PAATHAAQLF NKAPQDRTSV SKASITQKLP QKISHLLQTS QLEQYRQEIA HHQGIFKTTA SKTLGRPLQA KMQFDTAFNG MVLELTPDEA KTMLTVPQVL KVIKETPTEL QTDNGPQLIG ASNLWDGNAT GLAAKGDGII IGILDTGINT DNRAFSAVGD DGHNIINPLG SGNYLGDCVK DATLCNDKLI GVYSFPLVTD EYNGLRPANG EDYNGHGSHT ASTAAGNALV NVPVLMPNIG EEVGDGIETG TVLSNISGVA PHANIISYQV CDQSGCYPSL TIASVELAIK AGVDVLNYSI GPRGGVQNDP WNTASDIAFL SAREAGIFVA MAAGNAGPDA ETVGNVAPWA ISVAASSHQR VWSHVLSGSG VTGDPLPQIE GLADVFTSNG VINALSDETE IVYAGDYKDI NGNSLALCNS RVYFFDPVMA DLRGKVVICD RGEISLADKV TNMFFAAGVI IRNTPTSNQN MASARYALPS LLINELDGKQ LLEWMKRTDT PKVSISAANA EYDQANADIL ADFSSRGPYK WQTELMVPHI AAPGVDIYAA YADEMPFTSV NDAAPSDFAF LSGTSMASPH VAGSAALLRQ LHPDWTPAEI QSAMMLTATT NVLKEDGKTP AGIFDIGSGR LQIDKAAQAG LVMDVPIDEY KAANPELGGD VTSLNLPVLT STQCMNSCSW TRTLRATRDG SWTVSSNGNV DGVTISASPS SFDIKEGESV TVTFTANIAL RANEDWSFMQ VNLAPSDNSP MLSLPVAVKP LIALVPAFIT QDYFWNKGDL ELADFHFRYP ENLLFNIKPL EKATSYHLTL AADSDNRSPF DNVNDGTALS FINVPDGSSN LRVIVGESSA IDIDVFIGLD SNNNGIPEIV ELTQACATSM NVGEACRLNA GSGRYWVLAH NYKGSGDPLD AVRLDVLLQP NTETLPALVT IPNMSTKPYD ALSAHLSWSG DMIEGVYYSE LEVFDRNTPT AARAIARSNL VVNRVKPSVK IDLVKGDLSH RKEAELNIQL PTNPTSDSLT YTLNLAMADN LTITDVETNG DISLNHDKNN IKVTLAPGET STLIVAKINQ KSPISGDFKV DWSLNTDKSD FDVQQGSLMV SNTNKAPSLA VPKEIKGNMG SDVKFNIVSE DANQDPLSYT VTQISGPAVD IKDDGKGEVI LSLPEVNSSQ VAKFNVNVTD GEFSQSSDMS LEITYINTEN SGGAIFWSIV LLGLFGLRRK RLRTRSY
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