| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3235 |
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| Symbol | fliD |
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| ID | 1170927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3373852 |
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| End bp | 3375222 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637345050 |
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| Product | flagellar hook-associated protein FliD |
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| Protein accession | NP_718790 |
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| Protein GI | 24374747 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1345] Flagellar capping protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATAT CAGCGACAGG TATGGGGTCT GGTTTAGACA TTTCTAACAT TGTAAAAGTG
TTAGTGGATG CCGAGAAAGC GCCCAAAGAA GCGATGTTCA ACAAGACGGA AGACAGCATC
AAAGCAAAAG TTTCTGCGAT GGGAACTTTA AAAAGTGCGT TGTCTACGTT TCAGGATGCC
GTTAAGAAAC TTCAAACTGG TGATGCGTTA AATCAACGGA AAATTTCTGT TAGCACTGAT
GCATACCTTA GCGCCAAAGC TGAAAAAACA GCTCAAGCAG GTAGCTATGG GATTAAAGTT
GAGCAGGTAG CAACTAATCA TAAGATTGCA GGTACCAATG TTGCTGATGC CACACAACCA
GTGGGTGAGG GTAGTTTAGC ATTTGGTGTT AATGGTAAAA GCTTTTCTGT TGATATTGCT
GCTACCGATT CTTTGGCTGA AATTGCCAAA AAAGTCAATG AAGCCTCCGA TAATGTTGGG
GTCACTGCAA CAGTGATTAC CAGTGATGCC GGTAGTCGGT TAGTGTTTAG CGCAAATAAA
ACCGGTGAAG ATAACCAAAT TAGTCTCACT GCAACGAACA CCTCTGGTTC AGGGGTGACT
GATATGTTTG GTTCCGGCAA TACTTCGACA TTGCAAGATG CTAAAAATGC AGTACTTTAC
ATTGATGGTC AAAAAGTTAC CTCACAAAGT AATGAAGTAA AAAATGCCAT AACTGGTGTG
ACACTGAATT TGACGAATGC CGATGTGGCT AAAACCACGA CGGTTAAAAT TGAGCAAGAT
AATGAAGCGG TAAAAACAAA CGTTCAAGCT TTTGTTGATG CCTACAATAG TTTAGTGACG
ACCATCGATA AGATGTCCTC CTATGACAAA GATAAAAAAA CGGCAGCAGC ACTTCAGGGC
GACTCTATGA TTCGCTCAAT TGAATCTCAG CTTCGCAGTG TGGCAAGTGG ACGTGTTCCC
ACTGCGGATG GTGGTTCAAT AGCACTTTAT GATATTGGTA TTAAAGCAGA CAGGTACGGA
AAATTATCCG TAGATGATAC AAAACTCAAT AAAGCACTCA CCGAAGATAT GTCGAGCGTT
GAAGCACTAT TTGCAACTCC TGATAAAGGT CTTGCTAATC GGTTTAACGA TCTTGCCAAT
AGCTATGTTA AATCAAGTGG GTTAATTGCT GACCGTCAGT CTAGCTATAC TACTCAGCAA
AGTCGTTTGG CAGATCAAAG AGCGGCATTT ACACTGAAGA TGGACCAGCT AACCGCCCGT
TTAACGAAGC AATTTAATGC GATGGACCTT GTCGTTGGAA AACTCAACCA ACAAAGTAGT
GGGTTAGTTG ACCGACTAAA CTCATTGCCT GGTGCGGTTA AAAAGAGCTA A
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| Protein sequence | MAISATGMGS GLDISNIVKV LVDAEKAPKE AMFNKTEDSI KAKVSAMGTL KSALSTFQDA
VKKLQTGDAL NQRKISVSTD AYLSAKAEKT AQAGSYGIKV EQVATNHKIA GTNVADATQP
VGEGSLAFGV NGKSFSVDIA ATDSLAEIAK KVNEASDNVG VTATVITSDA GSRLVFSANK
TGEDNQISLT ATNTSGSGVT DMFGSGNTST LQDAKNAVLY IDGQKVTSQS NEVKNAITGV
TLNLTNADVA KTTTVKIEQD NEAVKTNVQA FVDAYNSLVT TIDKMSSYDK DKKTAAALQG
DSMIRSIESQ LRSVASGRVP TADGGSIALY DIGIKADRYG KLSVDDTKLN KALTEDMSSV
EALFATPDKG LANRFNDLAN SYVKSSGLIA DRQSSYTTQQ SRLADQRAAF TLKMDQLTAR
LTKQFNAMDL VVGKLNQQSS GLVDRLNSLP GAVKKS
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