Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3223 |
Symbol | fliK |
ID | 1170915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3361106 |
End bp | 3362689 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637345038 |
Product | flagellar hook-length control protein FliK |
Protein accession | NP_718778 |
Protein GI | 24374735 |
COG category | [N] Cell motility |
COG ID | [COG3144] Flagellar hook-length control protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAACAAA TGAACAATAT CCTATTAGCC TCAAGCGCGA AAAACACTGC TAGCTCAAGT AAAGTCATGG CGCAAGAGAC TAATAGTGAA GACTTTTCGG CAGCTTTGGC TTCAGTTGTT TCTGTTTCTG ATGCACCAAC TAAATCTAAC TTATCTAAAG ATACGCCTGT CAAATCAGGG CAACCAGAAT CCAGTACAGA TGAGGATCAT GCCGAGGATG CTACCGATAT CAACTTGATT TTTGCTCAAA TTGGTATGGC AAACGAGATG AAAAAAGCGG CCGCAACGGG CGATGCTTTG CCGCTTGAGG CTCAATTAAC GGCAATTGAA GATGCTGCTA GCTCATTATC AGTGTTGGCT GAGGGTGGCT CTTTACCAGC AGAAGAGGCC ACTTTTTTAG ATGAGCTAGC TAAATTTGCT GAGCCAGGCA AAGACTCCCA CGTGAGTGTT ACTGCTGATG CAGCTGTTAT GACACAAAGC GTAAATCAAA CTTCGACCTC AGAAGCGGAT AGCGGGCTAG CAAACCAAAC TAAAACCGAG CAGGGCACGG TGCAAACATC GCTACAGTTA TCACAGCAGG CTTCATCAAC GAACGAGTCT GAACTCACCG AATCTATCAA TGTGTTAACT TCAACGGCAA ATACGGATAT TTCCGATAAG ACTGGTCTTT TGGATGATGT GGAAGCTATT TTGGGATCGA AAGAGGATGA ATTGAATGGC AAATCGATCA ATGTGTCGAC TCAAGTAGCC GAGAAAACGA TTACGCCAAC GGTTGATCAT TTAGCATCAA ACAAAACGAC TAATGCCTCG GCGACAGATA CACAAGGATT GTCAGTAAAT ATGGCCACAG GGGTTAACAG CAAAGAGCCT AATACGCTAG GGGCTGTGCC TGTCGATCCG AATGCTAGTG ACGATAACCC CTCTCGCGCA GAAATTTCGG CGGGATTATT GTTAAAAGAC GCCAAGTTAG CCGTCGCGCT TGATGAACGG CAGGATAACA CTTTACCTTC ACTCGAAACG GGTAGCGAAA AATCTAGTGC TGAGTTTAAG CCTGTGGAGT TTAAAGCGGT ATCGACGTTG CACGCTATAA CGAATCAGCA AGTTCATCGC CAAGAAATAT CACCTGTTCA GCTTTCCTTA CGTCAAGGGG TTGAAAATCA AAACCAAATG CAGGAGATGA TCCAGCGCTT TTCTCCTGTG ATGAAGCAGC AACTGGTGAC TATGGTTAGC CAAGGTATTC AACAAGCTGA AATCCGCTTA GATCCACCCG AGCTCGGTCA TATGTTAGTT AAAATTCAGG TTCATGGTGA TCAGACACAA GTGCAGTTCC ATGTGGCACA ATCCCAGACC CGCGATCTAG TTGAACAGGC TATTCCTCGT TTACGTGAAT TGTTACAGGA ACAAGGCATG CAGCTTGCGG ACAGCCATGT CTCCCAAGGT GACCAAGGTC AACGCCGAGA AGGGGGATTT GGTGAAGCAG GAGGTTCAAG CGGTGGAAAT GTGGATGATT TCTCGGCAGA AGAGCTAGAT TTAGGTTTAA ATCAAGCAAC TAGTTTAAAT TCGGCTATAG ATTATTACGC TTAA
|
Protein sequence | MQQMNNILLA SSAKNTASSS KVMAQETNSE DFSAALASVV SVSDAPTKSN LSKDTPVKSG QPESSTDEDH AEDATDINLI FAQIGMANEM KKAAATGDAL PLEAQLTAIE DAASSLSVLA EGGSLPAEEA TFLDELAKFA EPGKDSHVSV TADAAVMTQS VNQTSTSEAD SGLANQTKTE QGTVQTSLQL SQQASSTNES ELTESINVLT STANTDISDK TGLLDDVEAI LGSKEDELNG KSINVSTQVA EKTITPTVDH LASNKTTNAS ATDTQGLSVN MATGVNSKEP NTLGAVPVDP NASDDNPSRA EISAGLLLKD AKLAVALDER QDNTLPSLET GSEKSSAEFK PVEFKAVSTL HAITNQQVHR QEISPVQLSL RQGVENQNQM QEMIQRFSPV MKQQLVTMVS QGIQQAEIRL DPPELGHMLV KIQVHGDQTQ VQFHVAQSQT RDLVEQAIPR LRELLQEQGM QLADSHVSQG DQGQRREGGF GEAGGSSGGN VDDFSAEELD LGLNQATSLN SAIDYYA
|
| |